BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0112.0025.p
         (370 letters)

Database: COG 
           115,334 sequences; 38,378,431 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BH1380_2 [S] COG3323 Uncharacterized protein conserved in bacteria    132   9e-31
BH1380_3 [S] COG0327 Uncharacterized conserved protein                127   4e-29
BS_yqfO_3 [S] COG0327 Uncharacterized conserved protein               125   1e-28
BS_yqfO_1 [S] COG0327 Uncharacterized conserved protein               119   7e-27
BH1380_1 [S] COG0327 Uncharacterized conserved protein                117   4e-26

>BH1380_2 [S] COG3323 Uncharacterized protein conserved in bacteria
          Length = 113

 Score =  132 bits (332), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 62/110 (56%), Positives = 83/110 (75%)

Query: 131 TEQLSKLVVFVPKDHHQKVLDAILNAGAGWIGNYSHCSFNIEGYGTFIPREGSDPYLGEK 190
           TE L KLVVFVP  H  +V +A+  AGAG IGNYS+C+FN +G GTF P EG++P++G++
Sbjct: 4   TESLYKLVVFVPHTHTDQVREALGRAGAGHIGNYSYCTFNSKGTGTFKPEEGTNPFIGKQ 63

Query: 191 GKLERAEEIRIETIVPQPIRNKVVQAMLKAHPYEEVAYDLYSMDLKGRSF 240
           G LE  EE++IETIV +  +NKVV AM+K+HPYEE AYDLY +  +G + 
Sbjct: 64  GALEFVEELKIETIVTEGQKNKVVAAMIKSHPYEEPAYDLYPLANEGETL 113


>BH1380_3 [S] COG0327 Uncharacterized conserved protein
          Length = 130

 Score =  127 bits (318), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 68/130 (52%), Positives = 85/130 (65%)

Query: 241 GLGRVGKLKEPTTLGQFIEKVKSGLQVDHVRVVGDLNRPIRKAAVLGGSGAKYYSSAIFK 300
           GLGR+G L E  TL +F ++VK    V   RVVG L   IRK AVLGG G KY + A+ K
Sbjct: 1   GLGRIGYLHESMTLEEFAKQVKKAFDVPTARVVGSLETQIRKVAVLGGDGNKYMAHALRK 60

Query: 301 GADVLVTGDIDYHTAQDAFLAGITLIDPGHNAEKIMKVKVAEWITAKLNEHKYQTAVHAS 360
           GADV+VTGD+ YH   DA + G+ ++DPGHN EKIMK  V E +   L + KY T V AS
Sbjct: 61  GADVIVTGDVYYHVPHDALMDGLNIVDPGHNVEKIMKQGVKEKLEKLLKDKKYDTEVVAS 120

Query: 361 KVNTEPFAFL 370
            V+T+PF F+
Sbjct: 121 SVHTDPFTFI 130


>BS_yqfO_3 [S] COG0327 Uncharacterized conserved protein
          Length = 133

 Score =  125 bits (313), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 64/130 (49%), Positives = 83/130 (63%)

Query: 241 GLGRVGKLKEPTTLGQFIEKVKSGLQVDHVRVVGDLNRPIRKAAVLGGSGAKYYSSAIFK 300
           GLGRVG LK   TL +F   VK  L V+ VR+VGD +  ++K AVLGG G KY   A  K
Sbjct: 4   GLGRVGTLKNEMTLKEFALFVKDKLDVNGVRMVGDADSMVKKVAVLGGDGNKYIHHAKRK 63

Query: 301 GADVLVTGDIDYHTAQDAFLAGITLIDPGHNAEKIMKVKVAEWITAKLNEHKYQTAVHAS 360
           GADV VTGD+ +H A DA + G+ ++DPGH AEKIMK  V   +T+  N+ K+   +  S
Sbjct: 64  GADVYVTGDLYFHVAHDAMMLGLNVVDPGHYAEKIMKEGVTRKLTSMCNDKKFGVNIFVS 123

Query: 361 KVNTEPFAFL 370
           + +T PF FL
Sbjct: 124 ETDTNPFTFL 133


>BS_yqfO_1 [S] COG0327 Uncharacterized conserved protein
          Length = 130

 Score =  119 bits (298), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 60/115 (52%), Positives = 74/115 (64%)

Query: 5   GQTVIGYMEQLAPKHLAEEWDNVGLQLGSLQKEITGXXXXXXXXXXXXXEAIAQGCNLII 64
           GQ +I   EQ +PK  A E D +GLQ+G+L K I               EAI +  +LII
Sbjct: 7   GQQIIQLFEQFSPKAYAVEGDKIGLQIGTLNKPIKNVMVTLDVLESVIDEAIEKEVDLII 66

Query: 65  AHHAIIFRPIKGIQTDTPMGKLYEKLIKHDIAVYISHTNLDVAEGGMNDWMAEAL 119
           AHH  IFR +K I TD P G+L EK +KHDIAVY +HTNLDVA+GG+ND +AEAL
Sbjct: 67  AHHPPIFRSLKHISTDQPAGRLIEKCLKHDIAVYAAHTNLDVADGGVNDLLAEAL 121


>BH1380_1 [S] COG0327 Uncharacterized conserved protein
          Length = 129

 Score =  117 bits (292), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 58/119 (48%), Positives = 75/119 (63%)

Query: 2   FAKGQTVIGYMEQLAPKHLAEEWDNVGLQLGSLQKEITGXXXXXXXXXXXXXEAIAQGCN 61
            A GQTVI   E+ +PK LA E D  G+ +G+L K I               EAI  G  
Sbjct: 3   IANGQTVIQLFERWSPKSLAVEGDKNGVLIGTLNKPIQRVLTALDVTESVIDEAIELGAE 62

Query: 62  LIIAHHAIIFRPIKGIQTDTPMGKLYEKLIKHDIAVYISHTNLDVAEGGMNDWMAEALG 120
           LI+AHH IIFRP+  I+TDT  G++ EK IKHD+ +Y +HTNLD+ +GG+ND MA+ALG
Sbjct: 63  LILAHHPIIFRPLSSIRTDTAYGRIIEKAIKHDLTIYAAHTNLDITKGGVNDLMADALG 121


  Database: COG
    Posted date:  Aug 3, 2010  9:58 AM
  Number of letters in database: 38,378,431
  Number of sequences in database:  115,334
  
Lambda     K      H
   0.318    0.137    0.403 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 115334
Number of Hits to DB: 26,821,467
Number of extensions: 1094929
Number of successful extensions: 3107
Number of sequences better than 1.0e-05: 16
Number of HSP's gapped: 3097
Number of HSP's successfully gapped: 16
Length of query: 370
Length of database: 38,378,431
Length adjustment: 108
Effective length of query: 262
Effective length of database: 25,922,359
Effective search space: 6791658058
Effective search space used: 6791658058
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 116 (49.3 bits)