BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0112.0003.p
         (119 letters)

Database: COG 
           115,334 sequences; 38,378,431 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CAC1287 [FGR] COG0537 Diadenosine tetraphosphate (Ap4A) hydrolas...   108   2e-24
aq_1418 [P] COG0735 Fe2+/Zn2+ uptake regulation proteins              104   3e-23
aq_141 [FGR] COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase...   104   3e-23
Cj0898 [FGR] COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase...    98   3e-21
VC1897 [FGR] COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase...    96   1e-20

>CAC1287 [FGR] COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and
          other HIT family hydrolases
          Length = 114

 Score =  108 bits (271), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 50/94 (53%), Positives = 70/94 (74%)

Query: 2  ETVFSKIIEGSIPSKKVFENERILAFYDIEPAAPVHVLIIPKKFIASMNDVAPEDLPLIG 61
          E +F KII+G IPS KV+E+E +LAF DI PAAPVHVL+IPKK I+S+ND+  E+  +I 
Sbjct: 3  ECIFCKIIKGEIPSSKVYEDEDVLAFNDISPAAPVHVLVIPKKHISSLNDINEENSKVIA 62

Query: 62 EIHAVAQQIAVELGIADSGYRLINNCGPDSGQAV 95
           +  V  ++A ELGI + G+R+++NCG  +GQ V
Sbjct: 63 HVFVVISKLAKELGIDEDGFRVVSNCGEAAGQTV 96


>aq_1418 [P] COG0735 Fe2+/Zn2+ uptake regulation proteins
          Length = 121

 Score =  104 bits (260), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 49/99 (49%), Positives = 72/99 (72%), Gaps = 5/99 (5%)

Query: 2   ETVFSKIIEGSIPSKKVFENERILAFYDIEPAAPVHVLIIPKKFIASMNDVAPEDLPLIG 61
           + +F KI+ G +P+KKV+E++++LAF+DI P APVH+LIIPKK I  +  + PED  L+G
Sbjct: 5   DCIFCKIVRGEVPAKKVYEDDKVLAFHDINPVAPVHILIIPKKHIMGIQTLEPEDECLVG 64

Query: 62  EIHAVAQQIAVELGIA-----DSGYRLINNCGPDSGQAV 95
            +  VA++IA +LGIA     + GYRL+ N G D+GQ+V
Sbjct: 65  HMFYVARKIAEDLGIAPDENLNKGYRLVFNVGKDAGQSV 103


>aq_141 [FGR] COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other
           HIT family hydrolases
          Length = 121

 Score =  104 bits (260), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 49/99 (49%), Positives = 72/99 (72%), Gaps = 5/99 (5%)

Query: 2   ETVFSKIIEGSIPSKKVFENERILAFYDIEPAAPVHVLIIPKKFIASMNDVAPEDLPLIG 61
           + +F KI+ G +P+KKV+E++++LAF+DI P APVH+LIIPKK I  +  + PED  L+G
Sbjct: 5   DCIFCKIVRGEVPAKKVYEDDKVLAFHDINPVAPVHILIIPKKHIMGIQTLEPEDECLVG 64

Query: 62  EIHAVAQQIAVELGIA-----DSGYRLINNCGPDSGQAV 95
            +  VA++IA +LGIA     + GYRL+ N G D+GQ+V
Sbjct: 65  HMFYVARKIAEDLGIAPDENLNKGYRLVFNVGKDAGQSV 103


>Cj0898 [FGR] COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and
          other HIT family hydrolases
          Length = 121

 Score = 97.8 bits (242), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 44/94 (46%), Positives = 64/94 (68%), Gaps = 3/94 (3%)

Query: 2  ETVFSKIIEGSIPSKKVFENERILAFYDIEPAAPVHVLIIPKKFIASMNDVAPEDLPLIG 61
          +T+F  I+EG +P  KV E++  LAF+DI P AP+H+LIIPKK+     +  PE   L+ 
Sbjct: 4  KTIFELIVEGKLPCNKVLESDDFLAFHDIAPKAPIHILIIPKKYFKDFQEFDPE---LMA 60

Query: 62 EIHAVAQQIAVELGIADSGYRLINNCGPDSGQAV 95
          ++ +  Q++AV LG+  SGYRL+ NCG +SGQ V
Sbjct: 61 KMTSFIQELAVLLGVDKSGYRLVTNCGKNSGQEV 94


>VC1897 [FGR] COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and
          other HIT family hydrolases
          Length = 116

 Score = 95.9 bits (237), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 46/94 (48%), Positives = 64/94 (68%)

Query: 2  ETVFSKIIEGSIPSKKVFENERILAFYDIEPAAPVHVLIIPKKFIASMNDVAPEDLPLIG 61
          ET+FSKI+   IP+  ++++E + AF DI P AP H+LIIP K I ++NDV  ED   +G
Sbjct: 4  ETIFSKIVRREIPADILYQDELVTAFRDIHPRAPSHILIIPNKLIPTVNDVEVEDELALG 63

Query: 62 EIHAVAQQIAVELGIADSGYRLINNCGPDSGQAV 95
           +  VA++IA + GIA++GYRLI NC    GQ V
Sbjct: 64 RLFTVAKKIAEQEGIAENGYRLIMNCNSHGGQEV 97


  Database: COG
    Posted date:  Aug 3, 2010  9:58 AM
  Number of letters in database: 38,378,431
  Number of sequences in database:  115,334
  
Lambda     K      H
   0.317    0.136    0.385 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 115334
Number of Hits to DB: 7,720,438
Number of extensions: 270433
Number of successful extensions: 489
Number of sequences better than 1.0e-05: 31
Number of HSP's gapped: 481
Number of HSP's successfully gapped: 31
Length of query: 119
Length of database: 38,378,431
Length adjustment: 86
Effective length of query: 33
Effective length of database: 28,459,707
Effective search space: 939170331
Effective search space used: 939170331
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 109 (46.6 bits)