BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0109.0023.p
         (119 letters)

Database: COG 
           115,334 sequences; 38,378,431 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DR0439 [S] COG0316 Uncharacterized conserved protein                  102   9e-23
YPO3387 [S] COG0316 Uncharacterized conserved protein                  96   1e-20
HI1723 [S] COG0316 Uncharacterized conserved protein                   96   1e-20
alr2385 [S] COG0316 Uncharacterized conserved protein                  96   2e-20
PM0458 [S] COG0316 Uncharacterized conserved protein                   95   2e-20

>DR0439 [S] COG0316 Uncharacterized conserved protein
          Length = 139

 Score =  102 bits (255), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 53/113 (46%), Positives = 73/113 (64%), Gaps = 1/113 (0%)

Query: 2   ITISEAAAGQLKTMLAEQEIPNMFLRLGVTEGGCSGFSYAMGFDDNETDQDVYMDVQGMK 61
           ITISE  A + +T+LA     N  +R+ +  GGCSG+ Y M  DD E + D  +  +G+K
Sbjct: 18  ITISEFGASKAQTILAGSGKENAGVRVFIKSGGCSGYQYGMAIDDRELEGDTIVVDRGVK 77

Query: 62  VVVSKDDIRYLNGLEIDFEESGMTGGFTINNPNATATCGCGSSFRTKDDAGKP 114
           ++V +  I  L G E+DF E+ M GGFT++NPNAT++CGCG SFRT D A  P
Sbjct: 78  LLVDRMSIELLRGSEVDFVENMMGGGFTVHNPNATSSCGCGHSFRT-DGAQSP 129


>YPO3387 [S] COG0316 Uncharacterized conserved protein
          Length = 114

 Score = 95.9 bits (237), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 45/104 (43%), Positives = 69/104 (66%)

Query: 2   ITISEAAAGQLKTMLAEQEIPNMFLRLGVTEGGCSGFSYAMGFDDNETDQDVYMDVQGMK 61
           +  +EAAA ++K +++++E PN+ LR+ +T GGCSGF Y   FDD   D D+ ++ QG++
Sbjct: 9   LQFTEAAAKKVKLLISDEENPNLKLRVYITGGGCSGFQYGFTFDDQVNDGDMTIEKQGVE 68

Query: 62  VVVSKDDIRYLNGLEIDFEESGMTGGFTINNPNATATCGCGSSF 105
           +VV    ++YL G  +D+ E      F + NPNA +TCGCGSSF
Sbjct: 69  LVVDPMSLQYLVGGAVDYTEGLEGSRFIVTNPNAKSTCGCGSSF 112


>HI1723 [S] COG0316 Uncharacterized conserved protein
          Length = 114

 Score = 95.9 bits (237), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 44/104 (42%), Positives = 72/104 (69%)

Query: 2   ITISEAAAGQLKTMLAEQEIPNMFLRLGVTEGGCSGFSYAMGFDDNETDQDVYMDVQGMK 61
           +T ++AAA ++K++++E+E  ++ LR+ +T GGCSGF Y   FD+   D D+ ++  G++
Sbjct: 9   LTFTDAAANKVKSLISEEENTDLKLRVYITGGGCSGFQYGFTFDEKVNDGDLTIEKSGVQ 68

Query: 62  VVVSKDDIRYLNGLEIDFEESGMTGGFTINNPNATATCGCGSSF 105
           +V+    ++YL G  +D+ E      FT+NNPNAT+TCGCGSSF
Sbjct: 69  LVIDPMSLQYLIGGTVDYTEGLEGSRFTVNNPNATSTCGCGSSF 112


>alr2385 [S] COG0316 Uncharacterized conserved protein
          Length = 359

 Score = 95.5 bits (236), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 4/106 (3%), Positives = 17/106 (16%), Gaps = 3/106 (2%)

Query: 2   ITISEAAAGQLKTMLAEQEIPNMFLRLGVTEGGCSGFSYAMGFDDNE--TDQDVYMDVQG 59
                    +     A + +  +           +  +            ++ + +   G
Sbjct: 12  ALRHNLQRLRELA-PASKMVAVVKANAYGHGLLETARTLPDADAFGVARLEEALRLRAGG 70

Query: 60  MKVVVSKDDIRYLNGLEIDFEESGMTGGFTINNPNATATCGCGSSF 105
           +   V   +  +                       A          
Sbjct: 71  ITKPVLLLEGFFDARDLPTISAQHFHTAVHNEEQLAALEEASLDEP 116


>PM0458 [S] COG0316 Uncharacterized conserved protein
          Length = 114

 Score = 95.1 bits (235), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 43/104 (41%), Positives = 68/104 (65%)

Query: 2   ITISEAAAGQLKTMLAEQEIPNMFLRLGVTEGGCSGFSYAMGFDDNETDQDVYMDVQGMK 61
           +  ++AAA ++K +++E+E PN+ LR+ +T GGCSGF Y   FD+   D D+ ++  G+ 
Sbjct: 9   LIFTDAAANKVKALISEEENPNLKLRVYITGGGCSGFQYGFTFDEKVNDGDLTIEKSGVH 68

Query: 62  VVVSKDDIRYLNGLEIDFEESGMTGGFTINNPNATATCGCGSSF 105
           +V+    ++YL G  +D+ E      F +NNPNA+ TCGCGSSF
Sbjct: 69  LVIDPMSLQYLIGGTVDYTEGLEGSRFVVNNPNASTTCGCGSSF 112


  Database: COG
    Posted date:  Aug 3, 2010  9:58 AM
  Number of letters in database: 38,378,431
  Number of sequences in database:  115,334
  
Lambda     K      H
   0.316    0.134    0.393 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 115334
Number of Hits to DB: 9,027,521
Number of extensions: 378445
Number of successful extensions: 578
Number of sequences better than 1.0e-05: 59
Number of HSP's gapped: 575
Number of HSP's successfully gapped: 59
Length of query: 119
Length of database: 38,378,431
Length adjustment: 86
Effective length of query: 33
Effective length of database: 28,459,707
Effective search space: 939170331
Effective search space used: 939170331
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 109 (46.6 bits)