BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0101.0010.p
         (144 letters)

Database: COG 
           115,334 sequences; 38,378,431 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

STM0865 [I] COG0671 Membrane-associated phospholipid phosphatase       74   6e-14
BS_ybbJ [KR] COG0454 Histone acetyltransferase HPA2 and related ...    48   6e-06

>STM0865 [I] COG0671 Membrane-associated phospholipid phosphatase
          Length = 346

 Score = 74.3 bits (181), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 9/127 (7%), Positives = 19/127 (14%), Gaps = 8/127 (6%)

Query: 1   MVVWVFWLIAAGVLFVVEMMTLTFYLLWLSIGALAACLVSLLLPDAILLQVLAGSLVALV 60
           M        +  V  +             +                 L+ V     V   
Sbjct: 1   MQYHRIPHSSLEVSTLGLGTMTFGEQNSEADAHAQLDYAVAQG--INLIDVAEMYPVPPR 58

Query: 61  LTIFSKPLVARFRSSRGFQDTGTDIVGRQGLVVAPIEPGR-YGQVKVGGDTWSATSIESL 119
                                  + +     V  P        +     D  +       
Sbjct: 59  PETQGLTETYVGNWLAKHG--SREKLIIASKVSGPSRNNDKGIRPDQALDRKNIREALH- 115

Query: 120 GKDEVVK 126
             D + +
Sbjct: 116 --DSLKR 120


>BS_ybbJ [KR] COG0454 Histone acetyltransferase HPA2 and related
           acetyltransferases
          Length = 151

 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 63/129 (48%), Gaps = 6/129 (4%)

Query: 5   VFWLIAAGVLFVVEMMTLTFYLLWLSIGALAACLVSLLLPDAILLQ-VLAGSLVALVLTI 63
           +FWL   G+L   EM+    YLLW  + A+   LV  L+P     Q V+   L  L   +
Sbjct: 10  IFWLSLGGLLLAAEMLGGNGYLLWSGVAAVITGLVVWLVPLGWEWQGVMFAILTLLAAWL 69

Query: 64  FSKPLVARFRSSR----GFQDTGTDIVGRQGLVVAPIEPGRYGQVKVGGDTWSATSIESL 119
           + K L  R R  +         G  ++GR+ ++ +P+  GR G ++VG  +W  ++ E L
Sbjct: 70  WWKWLSRRVREQKHSDSHLNQRGQQLIGRRFVLESPLVNGR-GHMRVGDSSWPVSASEDL 128

Query: 120 GKDEVVKVV 128
           G    V+V+
Sbjct: 129 GAGTHVEVI 137


  Database: COG
    Posted date:  Aug 3, 2010  9:58 AM
  Number of letters in database: 38,378,431
  Number of sequences in database:  115,334
  
Lambda     K      H
   0.326    0.141    0.428 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 115334
Number of Hits to DB: 10,297,410
Number of extensions: 410369
Number of successful extensions: 1876
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 1876
Number of HSP's successfully gapped: 2
Length of query: 144
Length of database: 38,378,431
Length adjustment: 96
Effective length of query: 48
Effective length of database: 27,306,367
Effective search space: 1310705616
Effective search space used: 1310705616
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 110 (47.0 bits)