BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0099.0001.p (244 letters) Database: COG 115,334 sequences; 38,378,431 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BS_yeeI [S] COG0217 Uncharacterized conserved protein 359 2e-99 lin0388 [S] COG0217 Uncharacterized conserved protein 330 1e-90 yeeN [S] COG0217 Uncharacterized conserved protein 260 1e-69 Z3140 [S] COG0217 Uncharacterized conserved protein 259 3e-69 ECs2780 [S] COG0217 Uncharacterized conserved protein 259 3e-69 >BS_yeeI [S] COG0217 Uncharacterized conserved protein Length = 278 Score = 359 bits (922), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 12/237 (5%), Positives = 35/237 (14%), Gaps = 1/237 (0%) Query: 6 MGRKWNNIKEKKASKDANTSKVYAKFGVEIYVAAKKGEPDPESNRALKVVLERAKTYNVP 65 M ++ K + + P + Sbjct: 1 MQFCSSDEFASKTMIKWPWKVQESAHQTALPWQEALSIPLLTCLTEQEQSKLVTLAERFL 60 Query: 66 KAIIDRALDKAKGSGDENYVELRYEGFGPSGSMIIIDALTNNVNRTAPLVRSAFSKNGGN 125 + L + + + + V Sbjct: 61 QQKRLVPLQGFELDSLRSCRIALLFCLPVLELGLEWLDGFHEVLIYPAPFVVDDEWEDDI 120 Query: 126 MGVSGSVTYMFEPTAVIGLEGKTADEVMELLIXXXXXXXX-XXXXXXXXIVYAEPDQFHA 184 V + G ++ + Sbjct: 121 GLVHNQRIVQSGQSWQQGPIVLNWLDIQDSFDASGFNLIIHEVAHKLDTRNGDRASGVPF 180 Query: 185 VQEVFRSAGITDFTVAELTMLPQNYVTLPEDAEAQFEKLIDALEELDDVQQVYHNVD 241 + + D A + + + A D E + + + + Sbjct: 181 IPLREVAGWEHDLHAAMNNIQEEIELVGENAASIDAYAASDPAECFAVLSEYFFSAP 237 >lin0388 [S] COG0217 Uncharacterized conserved protein Length = 239 Score = 330 bits (845), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 157/239 (65%), Positives = 192/239 (80%) Query: 6 MGRKWNNIKEKKASKDANTSKVYAKFGVEIYVAAKKGEPDPESNRALKVVLERAKTYNVP 65 MGRKW NIKEKKASKD S++YAKFG+EIYVAAK G+PDP SN+ L+ V+ERAKTYNVP Sbjct: 1 MGRKWANIKEKKASKDKTNSRIYAKFGIEIYVAAKSGDPDPHSNQKLRFVIERAKTYNVP 60 Query: 66 KAIIDRALDKAKGSGDENYVELRYEGFGPSGSMIIIDALTNNVNRTAPLVRSAFSKNGGN 125 K IIDRA++KAKG+GDE Y ELRYEGFGP+GSMII+DALTNNVNRTA VR+A+SKNGGN Sbjct: 61 KHIIDRAIEKAKGTGDETYSELRYEGFGPNGSMIIVDALTNNVNRTASDVRAAYSKNGGN 120 Query: 126 MGVSGSVTYMFEPTAVIGLEGKTADEVMELLIXXXXXXXXXXXXXXXXIVYAEPDQFHAV 185 MGVSGSV YMF+ TA+ G+EGK ADE++ELL+ I+YAEP+ FH V Sbjct: 121 MGVSGSVAYMFDNTAIFGVEGKDADELLELLMEADIDVRDILDEDGQAIIYAEPEDFHKV 180 Query: 186 QEVFRSAGITDFTVAELTMLPQNYVTLPEDAEAQFEKLIDALEELDDVQQVYHNVDSEE 244 QE ++AGI +FTVAE+ M+PQN + L + +FEKLIDALE+L+DVQ+VYHNV+ E+ Sbjct: 181 QEGLKAAGIEEFTVAEIEMIPQNDIQLSGEDLEKFEKLIDALEDLEDVQKVYHNVELED 239 >yeeN [S] COG0217 Uncharacterized conserved protein Length = 238 Score = 260 bits (664), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 130/236 (55%), Positives = 164/236 (69%), Gaps = 2/236 (0%) Query: 6 MGRKWNNIKEKKASKDANTSKVYAKFGVEIYVAAKKGEPDPESNRALKVVLERAKTYNVP 65 MGRKW NI KK +KD TSK+YAKFGVEIY AAK+GEPDPE N +LK V+ERAK VP Sbjct: 1 MGRKWANIVAKKTAKDGATSKIYAKFGVEIYAAAKQGEPDPELNTSLKFVIERAKQAQVP 60 Query: 66 KAIIDRALDKAKGSGDENYVELRYEGFGPSGSMIIIDALTNNVNRTAPLVRSAFSKNGGN 125 K +ID+A+DKAKG GDE +V+ RYEGFGP+GSMII + LT+NVNRT VR+ F+K GGN Sbjct: 61 KHVIDKAIDKAKGGGDETFVQGRYEGFGPNGSMIIAETLTSNVNRTIANVRTIFNKKGGN 120 Query: 126 MGVSGSVTYMFEPTAVIGLEGKTADEVMELLIXXXXXXXXXXXXXXXXIVYAEPDQFHAV 185 +G +GSV+YMF+ T VI +G D + E+L+ ++Y EP H Sbjct: 121 IGAAGSVSYMFDNTGVIVFKGTDPDHIFEILLEAEVDVRDVTEEEGNIVIYTEPTDLHKG 180 Query: 186 QEVFRSAGITDFTVAELTMLPQNYVTL-PEDAEAQFEKLIDALEELDDVQQVYHNV 240 ++AGIT+F+ EL M+ Q+ V L PED E FE L+DALE+ DDVQ+VYHNV Sbjct: 181 IAALKAAGITEFSTTELEMIAQSEVELSPEDLEI-FEGLVDALEDDDDVQKVYHNV 235 >Z3140 [S] COG0217 Uncharacterized conserved protein Length = 238 Score = 259 bits (661), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 129/236 (54%), Positives = 164/236 (69%), Gaps = 2/236 (0%) Query: 6 MGRKWNNIKEKKASKDANTSKVYAKFGVEIYVAAKKGEPDPESNRALKVVLERAKTYNVP 65 MGRKW NI KK +KD TSK+YAKFGVEIY AAK+GEPDPE N +LK V+ERAK VP Sbjct: 1 MGRKWANIVAKKTAKDGATSKIYAKFGVEIYAAAKQGEPDPELNTSLKFVIERAKQAQVP 60 Query: 66 KAIIDRALDKAKGSGDENYVELRYEGFGPSGSMIIIDALTNNVNRTAPLVRSAFSKNGGN 125 K +ID+A+DKAKG GDE +V+ RYEGFGP+GSMII + LT+NVNRT VR+ F+K GGN Sbjct: 61 KHVIDKAIDKAKGGGDETFVQGRYEGFGPNGSMIIAETLTSNVNRTIANVRTIFNKKGGN 120 Query: 126 MGVSGSVTYMFEPTAVIGLEGKTADEVMELLIXXXXXXXXXXXXXXXXIVYAEPDQFHAV 185 +G +GSV+YMF+ T VI +G D + E+L+ ++Y EP H Sbjct: 121 IGAAGSVSYMFDNTGVIVFKGSDPDHIFEILLEAEVDVRDVTEEEGNIVIYTEPTDLHKG 180 Query: 186 QEVFRSAGITDFTVAELTMLPQNYVTL-PEDAEAQFEKLIDALEELDDVQQVYHNV 240 ++AGI++F+ EL M+ Q+ V L PED E FE L+DALE+ DDVQ+VYHNV Sbjct: 181 IAALKAAGISEFSTTELEMIAQSEVELSPEDLEI-FEGLVDALEDDDDVQKVYHNV 235 >ECs2780 [S] COG0217 Uncharacterized conserved protein Length = 238 Score = 259 bits (661), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 129/236 (54%), Positives = 164/236 (69%), Gaps = 2/236 (0%) Query: 6 MGRKWNNIKEKKASKDANTSKVYAKFGVEIYVAAKKGEPDPESNRALKVVLERAKTYNVP 65 MGRKW NI KK +KD TSK+YAKFGVEIY AAK+GEPDPE N +LK V+ERAK VP Sbjct: 1 MGRKWANIVAKKTAKDGATSKIYAKFGVEIYAAAKQGEPDPELNTSLKFVIERAKQAQVP 60 Query: 66 KAIIDRALDKAKGSGDENYVELRYEGFGPSGSMIIIDALTNNVNRTAPLVRSAFSKNGGN 125 K +ID+A+DKAKG GDE +V+ RYEGFGP+GSMII + LT+NVNRT VR+ F+K GGN Sbjct: 61 KHVIDKAIDKAKGGGDETFVQGRYEGFGPNGSMIIAETLTSNVNRTIANVRTIFNKKGGN 120 Query: 126 MGVSGSVTYMFEPTAVIGLEGKTADEVMELLIXXXXXXXXXXXXXXXXIVYAEPDQFHAV 185 +G +GSV+YMF+ T VI +G D + E+L+ ++Y EP H Sbjct: 121 IGAAGSVSYMFDNTGVIVFKGSDPDHIFEILLEAEVDVRDVTEEEGNIVIYTEPTDLHKG 180 Query: 186 QEVFRSAGITDFTVAELTMLPQNYVTL-PEDAEAQFEKLIDALEELDDVQQVYHNV 240 ++AGI++F+ EL M+ Q+ V L PED E FE L+DALE+ DDVQ+VYHNV Sbjct: 181 IAALKAAGISEFSTTELEMIAQSEVELSPEDLEI-FEGLVDALEDDDDVQKVYHNV 235 Database: COG Posted date: Aug 3, 2010 9:58 AM Number of letters in database: 38,378,431 Number of sequences in database: 115,334 Lambda K H 0.312 0.131 0.360 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 115334 Number of Hits to DB: 17,065,173 Number of extensions: 723278 Number of successful extensions: 1203 Number of sequences better than 1.0e-05: 15 Number of HSP's gapped: 1180 Number of HSP's successfully gapped: 15 Length of query: 244 Length of database: 38,378,431 Length adjustment: 104 Effective length of query: 140 Effective length of database: 26,383,695 Effective search space: 3693717300 Effective search space used: 3693717300 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits) S2: 114 (48.5 bits)