BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0087.0002.p (281 letters) Database: COG 115,334 sequences; 38,378,431 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value CAC3396 [L] COG2816 NTP pyrophosphohydrolases containing a Zn-fi... 231 1e-60 AGc1506 [P] COG1118 ABC-type sulfate/molybdate transport systems... 138 1e-32 AGc1508 [CR] COG0604 NADPH:quinone reductase and related Zn-depe... 138 1e-32 AGc1503 [O] COG0555 ABC-type sulfate transport system, permease ... 138 1e-32 AGc1505 [P] COG4208 ABC-type sulfate transport system, permease ... 138 1e-32 >CAC3396 [L] COG2816 NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding Length = 289 Score = 231 bits (589), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 11/251 (4%), Positives = 43/251 (17%), Gaps = 9/251 (3%) Query: 31 FHSGRLLV-TENAGITGIPFIPALEQISMTPL---RTLYLGTFEGIACFAAQVQAETPEP 86 + + + + + + Sbjct: 23 SLDNVAAKAGYSK-----WHLQRMFKDVTGHAIGAYIRARRLSKSAVALRLTARPILDIA 77 Query: 87 EGMAFRPLRSLYESLDEDLFHLAGKGIQMLAWDETHQFCGRCGTATELVQTEHSRSCPAC 146 F ++ + + + W + + + Sbjct: 78 LQYRFDSQQTFTRAFKKQFAQTPALYRRSPEWSAFGIRPPLRLGEFTMPEHKFVTLEDTP 137 Query: 147 GLVSYPRIAPAVITAILKDNRILLAHSPHFVNNMYGLIAGFVEPGETLEDCVQRETMEEV 206 + + ++ + + F+ N + ET + + E Sbjct: 138 LIGVTQSYSCSLEQISDFRHEMRYQFWHDFLGNAPTIPPVLYGLNETRPSQDKDDEQEVF 197 Query: 207 GIKVKNIRYFASQQWPFPHSLMVGFLAEYESGEITVDGEELDHADWFELDRLPVIPSPVS 266 ++ G + E G + + + + Sbjct: 198 YTTALAQDQADGYVLTGHPVMLQGGEYVMFTYEGLGTGVQEFILTVYGTCMPMLNLTRRK 257 Query: 267 IARKLIDWVVE 277 + E Sbjct: 258 GQDIERYYPAE 268 >AGc1506 [P] COG1118 ABC-type sulfate/molybdate transport systems, ATPase component Length = 370 Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 14/197 (7%), Positives = 35/197 (17%), Gaps = 16/197 (8%) Query: 95 RSLYES--LDEDLFHLAGKGIQMLAWDETHQFCGRCGTATELVQTEHSRSCPACGLVSYP 152 R E +D D + R S Sbjct: 120 RRPPELVDIDNDNRPDGFDPSYAFGKADEEGISYFPDRRAIDEGCLRGRGLEIAWARSKV 179 Query: 153 RIAPAVITAILKDNR--ILLAHSPHFVNNMYGLIAGFVEPGETLEDCVQRETMEEVGIKV 210 + + + + + + + E + +M+ + + Sbjct: 180 DLFFVHVQGAARLVFPDGAIKRITYAAKAGHVFSPIGRLLLDRGELDPKTISMQTIRQWL 239 Query: 211 KNIRYFASQQWPFPHSLMVGFLAEYESGEITVDGEELDHADWF---ELDRLPVIPS---- 263 + S + A+ ++ +DRL Sbjct: 240 ADHPDEVDGVLWHNRSYIFFREADVAGLDMGPIAAAKVPLVAGRALAVDRLIHTFGLPFF 299 Query: 264 ---PV-SIARKLI-DWV 275 P + Sbjct: 300 IHAPTLTHLDDGKPFAR 316 >AGc1508 [CR] COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases Length = 346 Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 12/197 (6%), Positives = 26/197 (13%), Gaps = 16/197 (8%) Query: 95 RSLYES--LDEDLFHLAGKGIQMLAWDETHQFCGRCGTATELVQTEHSRSCPACGLVSYP 152 R + L + + L + + Sbjct: 120 RLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDTLDALAEYQRAGKIRYIGVS 179 Query: 153 RIAPAVITAILKDNR--ILLAHSPHFVNNMYGLIAGFVEPGETLEDCVQRETMEEVGIKV 210 + L L + V E + Sbjct: 180 NETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSCLGFG 239 Query: 211 KNIRYFASQQWPFPHSLMVGFLAEYESGEITVDGEELDHADWF---ELDRLPVIPS---- 263 + + P + SGE T + Sbjct: 240 TLTGKYLNGAKPAGARNTLFSRFTRYSGEQTQKAVAAYVDIARRHGLDPAQMALAFVRRQ 299 Query: 264 ---PV-SIARKLI-DWV 275 + + Sbjct: 300 PFVASTLLGATTMDQLK 316 >AGc1503 [O] COG0555 ABC-type sulfate transport system, permease component Length = 370 Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 14/197 (7%), Positives = 35/197 (17%), Gaps = 16/197 (8%) Query: 95 RSLYES--LDEDLFHLAGKGIQMLAWDETHQFCGRCGTATELVQTEHSRSCPACGLVSYP 152 R E +D D + R S Sbjct: 120 RRPPELVDIDNDNRPDGFDPSYAFGKADEEGISYFPDRRAIDEGCLRGRGLEIAWARSKV 179 Query: 153 RIAPAVITAILKDNR--ILLAHSPHFVNNMYGLIAGFVEPGETLEDCVQRETMEEVGIKV 210 + + + + + + + E + +M+ + + Sbjct: 180 DLFFVHVQGAARLVFPDGAIKRITYAAKAGHVFSPIGRLLLDRGELDPKTISMQTIRQWL 239 Query: 211 KNIRYFASQQWPFPHSLMVGFLAEYESGEITVDGEELDHADWF---ELDRLPVIPS---- 263 + S + A+ ++ +DRL Sbjct: 240 ADHPDEVDGVLWHNRSYIFFREADVAGLDMGPIAAAKVPLVAGRALAVDRLIHTFGLPFF 299 Query: 264 ---PV-SIARKLI-DWV 275 P + Sbjct: 300 IHAPTLTHLDDGKPFAR 316 >AGc1505 [P] COG4208 ABC-type sulfate transport system, permease component Length = 370 Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 14/197 (7%), Positives = 35/197 (17%), Gaps = 16/197 (8%) Query: 95 RSLYES--LDEDLFHLAGKGIQMLAWDETHQFCGRCGTATELVQTEHSRSCPACGLVSYP 152 R E +D D + R S Sbjct: 120 RRPPELVDIDNDNRPDGFDPSYAFGKADEEGISYFPDRRAIDEGCLRGRGLEIAWARSKV 179 Query: 153 RIAPAVITAILKDNR--ILLAHSPHFVNNMYGLIAGFVEPGETLEDCVQRETMEEVGIKV 210 + + + + + + + E + +M+ + + Sbjct: 180 DLFFVHVQGAARLVFPDGAIKRITYAAKAGHVFSPIGRLLLDRGELDPKTISMQTIRQWL 239 Query: 211 KNIRYFASQQWPFPHSLMVGFLAEYESGEITVDGEELDHADWF---ELDRLPVIPS---- 263 + S + A+ ++ +DRL Sbjct: 240 ADHPDEVDGVLWHNRSYIFFREADVAGLDMGPIAAAKVPLVAGRALAVDRLIHTFGLPFF 299 Query: 264 ---PV-SIARKLI-DWV 275 P + Sbjct: 300 IHAPTLTHLDDGKPFAR 316 Database: COG Posted date: Aug 3, 2010 9:58 AM Number of letters in database: 38,378,431 Number of sequences in database: 115,334 Lambda K H 0.322 0.138 0.428 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 115334 Number of Hits to DB: 21,301,543 Number of extensions: 882751 Number of successful extensions: 10721 Number of sequences better than 1.0e-05: 9 Number of HSP's gapped: 10728 Number of HSP's successfully gapped: 9 Length of query: 281 Length of database: 38,378,431 Length adjustment: 105 Effective length of query: 176 Effective length of database: 26,268,361 Effective search space: 4623231536 Effective search space used: 4623231536 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 115 (48.9 bits)