BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0081.0001.p
         (140 letters)

Database: COG 
           115,334 sequences; 38,378,431 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

lin1763 [E] COG2856 Predicted Zn peptidase                             78   3e-15
lin1233 [E] COG2856 Predicted Zn peptidase                             69   2e-12

>lin1763 [E] COG2856 Predicted Zn peptidase
          Length = 140

 Score = 78.2 bits (191), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 52/133 (39%), Positives = 75/133 (56%), Gaps = 7/133 (5%)

Query: 9   NKLIKKYKTNSPFELSKALGIHIRFMNLGQSTKGLYYRKLRRRFIVIHNELPLEWQRFVC 68
           + +IKK+ T +PFE+++ L I I F +LG +  G Y  K R + I I+  + ++ Q F C
Sbjct: 12  DDIIKKWNTRNPFEIAEFLEIAIFFEDLG-NMYGYYNMKNRIKMIHINENITIDEQIFTC 70

Query: 69  AHELGHDRLHKGINRFFLEENSYFSPGKLERQANLFAIKLLSSGSSPE---QEEPLLRYY 125
           AHEL H   H+  N  FL E++  S  K+E QAN  A +LL +    +    +  LLRYY
Sbjct: 71  AHELQHAIFHEQANTPFLSEHTLQSVQKIETQANFLATRLLIANRKIDGINTKIELLRYY 130

Query: 126 LRIGIPPEVIFFL 138
              GIP E+  FL
Sbjct: 131 ---GIPLEMARFL 140


>lin1233 [E] COG2856 Predicted Zn peptidase
          Length = 139

 Score = 68.6 bits (166), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 70/135 (51%)

Query: 5   DEIINKLIKKYKTNSPFELSKALGIHIRFMNLGQSTKGLYYRKLRRRFIVIHNELPLEWQ 64
           ++++  L  K+ T+ PFEL + L I +   NL   T G Y    R RFI  ++ L     
Sbjct: 4   NQMLEMLRNKHHTSDPFELCEILNIIVTPWNLANDTNGFYKYVRRNRFIFYNSNLSDYQV 63

Query: 65  RFVCAHELGHDRLHKGINRFFLEENSYFSPGKLERQANLFAIKLLSSGSSPEQEEPLLRY 124
           ++V AHELGH  LH  +N  F +   + +  K+E +A+ FA+ LL S    ++ E     
Sbjct: 64  KYVVAHELGHAVLHTRLNATFTKSIHWSNLSKIEVEAHQFAVNLLLSEIELDKFETKRDI 123

Query: 125 YLRIGIPPEVIFFLD 139
            L  GIP E+  F++
Sbjct: 124 CLFSGIPIEMERFIN 138


  Database: COG
    Posted date:  Aug 3, 2010  9:58 AM
  Number of letters in database: 38,378,431
  Number of sequences in database:  115,334
  
Lambda     K      H
   0.324    0.143    0.425 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 115334
Number of Hits to DB: 10,714,014
Number of extensions: 473415
Number of successful extensions: 504
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 503
Number of HSP's successfully gapped: 2
Length of query: 140
Length of database: 38,378,431
Length adjustment: 96
Effective length of query: 44
Effective length of database: 27,306,367
Effective search space: 1201480148
Effective search space used: 1201480148
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 110 (47.0 bits)