BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0027.0030.p
         (587 letters)

Database: COG 
           115,334 sequences; 38,378,431 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

TM1595 [R] COG0618 Exopolyphosphatase-related proteins                 50   8e-06
TM0587_3 [C] COG1227 Inorganic pyrophosphatase/exopolyphosphatase      50   9e-06

>TM1595 [R] COG0618 Exopolyphosphatase-related proteins
          Length = 346

 Score = 50.4 bits (119), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 9/232 (3%), Positives = 31/232 (13%), Gaps = 28/232 (12%)

Query: 328 LMQESDRVLIMGHRTPDIDAVGASIGLLKAAQMYNVEANIVMETPNPSITRMMEQIRRDE 387
                +   +        +    +    +         N++       +    E     E
Sbjct: 7   PHSSLEVSTLGLGTMTFGEQNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPETQGLTE 66

Query: 388 GLNKSFISTEQALQVMTEHTLLIVVDTHKASMTMEPRLVQYASRIVVVDHHRRGEEFIND 447
                                    +    +  +          I       R       
Sbjct: 67  T-YVGN-----------WLAKHGSREKLIIASKVSGPSRNNDKGIRPDQALDRKNIREA- 113

Query: 448 AVLVYLEPYASSTCELVTELLQYIHDKIKLSPLEATMLLAGITVDTKHFALHTGS--RTF 505
             L        +    + ++      +      +                    +     
Sbjct: 114 --LHDSLKRLQTDYLDLYQVHWPQ--RPTNCFGKLGYSWTDSAPAVSLLD-TLDALAEYQ 168

Query: 506 EAAGFLRRVGADTILIQRMLKED--------LQEYISKAEIIKHARMVYDHI 549
            A        ++      M                I     + +        
Sbjct: 169 RAGKIRYIGVSNETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEVGLA 220


>TM0587_3 [C] COG1227 Inorganic pyrophosphatase/exopolyphosphatase
          Length = 346

 Score = 50.4 bits (119), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 6/144 (4%), Positives = 22/144 (15%), Gaps = 10/144 (6%)

Query: 409 LIVVDTHKASMTMEPRLVQYASRIVVVDHHRRGEEFINDAVLVYLEPYASSTCELVTELL 468
              +      + +    +   +            +               +    V    
Sbjct: 3   YHRIPHSS--LEVSTLGLGTMTFGEQNSEADAHAQLDYAVAQGINLI-DVAEMYPVPPR- 58

Query: 469 QYIHDKIKLSPLEATMLLAGITVDTKHFALHTGS-RTFEAAGFLRRVGADTI--LIQRML 525
                 +  + +   +   G        +  +G  R  +      +              
Sbjct: 59  -PETQGLTETYVGNWLAKHGSREKLIIASKVSGPSRNNDKGIRPDQALDRKNIREALHDS 117

Query: 526 KEDLQ--EYISKAEIIKHARMVYD 547
            + LQ                   
Sbjct: 118 LKRLQTDYLDLYQVHWPQRPTNCF 141


  Database: COG
    Posted date:  Aug 3, 2010  9:58 AM
  Number of letters in database: 38,378,431
  Number of sequences in database:  115,334
  
Lambda     K      H
   0.321    0.135    0.373 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 115334
Number of Hits to DB: 38,441,191
Number of extensions: 1474069
Number of successful extensions: 5448
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 5458
Number of HSP's successfully gapped: 2
Length of query: 587
Length of database: 38,378,431
Length adjustment: 112
Effective length of query: 475
Effective length of database: 25,461,023
Effective search space: 12093985925
Effective search space used: 12093985925
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 119 (50.4 bits)