BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0019.0011.p
         (95 letters)

Database: COG 
           115,334 sequences; 38,378,431 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

MT1196 [H] COG2154 Pterin-4a-carbinolamine dehydratase                 55   3e-08
MT3426 [H] COG2154 Pterin-4a-carbinolamine dehydratase                 54   7e-08

>MT1196 [H] COG2154 Pterin-4a-carbinolamine dehydratase
          Length = 346

 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 6/89 (6%), Positives = 19/89 (21%)

Query: 3  FTEEELREQVSKLEGWKLEQNTLVRKYMFNEYMKGIAFVDEVAAISEAFEHHPHITVDYK 62
               L            E +   +          +  V E+  +    E          
Sbjct: 11 LEVSTLGLGTMTFGEQNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPETQGLTETYVG 70

Query: 63 TVFLRLSAAEEEGLTTLDIRQAHEFNEAF 91
              +  + E+  + +     +   ++  
Sbjct: 71 NWLAKHGSREKLIIASKVSGPSRNNDKGI 99


>MT3426 [H] COG2154 Pterin-4a-carbinolamine dehydratase
          Length = 346

 Score = 53.5 bits (127), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 6/87 (6%), Positives = 14/87 (16%), Gaps = 1/87 (1%)

Query: 3   FTEEELREQVSKLEGWKLEQNTLVRKYMFNEYMKGIAFVDEVAAISEAFEHHPHITV-DY 61
               E               N +    M+    +          +      H        
Sbjct: 25  EQNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPETQGLTETYVGNWLAKHGSREKLII 84

Query: 62  KTVFLRLSAAEEEGLTTLDIRQAHEFN 88
            +     S   ++G+            
Sbjct: 85  ASKVSGPSRNNDKGIRPDQALDRKNIR 111


  Database: COG
    Posted date:  Aug 3, 2010  9:58 AM
  Number of letters in database: 38,378,431
  Number of sequences in database:  115,334
  
Lambda     K      H
   0.317    0.132    0.369 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 115334
Number of Hits to DB: 6,236,766
Number of extensions: 198389
Number of successful extensions: 433
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 433
Number of HSP's successfully gapped: 2
Length of query: 95
Length of database: 38,378,431
Length adjustment: 64
Effective length of query: 31
Effective length of database: 30,997,055
Effective search space: 960908705
Effective search space used: 960908705
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 109 (46.6 bits)