BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0012.0005.p
         (506 letters)

Database: COG 
           115,334 sequences; 38,378,431 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

MA4007 [G] COG0696 Phosphoglyceromutase                               503   e-142
MA2671 [G] COG0696 Phosphoglyceromutase                               482   e-136

>MA4007 [G] COG0696 Phosphoglyceromutase
          Length = 346

 Score =  503 bits (1296), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 0/505 (0%), Positives = 0/505 (0%), Gaps = 5/505 (0%)

Query: 1   LIIMDGFGLRNTTEGNAVAQANKPNYDRYLKQYPNTTLTACGEAVGLPEGQMGNSEVGHL 60
           L +         +E +A AQ +                            +         
Sbjct: 16  LGLGTMTFGEQNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPETQGLTETYVGNWLAK 75

Query: 61  NIGAGRIVYQDLTRIDKSIREGEFFENETLVAAVRSAKSTGKKLHLYALVSDGGVHSHIN 120
           +    +++            +     ++ L               L     D        
Sbjct: 76  HGSREKLIIASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLKRLQTDYLDLYQVHWPQ 135

Query: 121 HLFAMLDLAKKEDMHDVYIHAFMDGRDVPPDSGQKFIKDLIAKIEEVGVGKIATVSGRYF 180
                               + +D  D   +  +      I    E   G +  +     
Sbjct: 136 RPTNCFGKLGYSWTDSAPAVSLLDTLDALAEYQRAGKIRYIGVSNETAFGVMRYLHLADK 195

Query: 181 AMDRDKRWERVEKAYRAMVYGEGPKYT-DALQAITASYQNSVYDEFVEPSVIVDSEGKPT 239
                    +   +     +  G             +Y    +       +         
Sbjct: 196 HDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSCLGFGTLTGKYLNGAKPAGAR 255

Query: 240 ATVESGDSVVFLNFRPDRAIQLSQVFTNSDFRGFDRGPLFPQNLHFVCLTTFSETVQGYV 299
            T+ S  +                +                       + +         
Sbjct: 256 NTLFSRFTRYSGEQTQKAVAAYVDIARRHGLDPAQMAL--AFVRRQPFVASTLLGATTMD 313

Query: 300 AYSPKNLDNTLGEVLVQQNKKQLRIAETEKYPHVTFFFSGGRDEELPGETRILINSPKVA 359
                                                                       
Sbjct: 314                                                              373

Query: 360 TYDLKPEMSXXXXXXXXXXXXXXDRQDAIILNFANPDMVGHSGMLEPTIKAVEVTDECXX 419
                                                                       
Sbjct: 374                                                              433

Query: 420 XXXXXXXXXXXXXXXXXXHGNADMVFDEQ-GRPFTAHTTNPVPFIVTTE-NVVLRESGIL 477
                                                                       
Sbjct: 434                                                              493

Query: 478 ADVAPTILDLMGLPQPAEMTGQSMI 502
                                    
Sbjct: 494                           518


>MA2671 [G] COG0696 Phosphoglyceromutase
          Length = 346

 Score =  482 bits (1241), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 0/505 (0%), Positives = 0/505 (0%), Gaps = 5/505 (0%)

Query: 1   LIIMDGFGLRNTTEGNAVAQANKPNYDRYLKQYPNTTLTACGEAVGLPEGQMGNSEVGHL 60
            + +   GL   T G   ++A+      Y        +         P  +       ++
Sbjct: 10  SLEVSTLGLGTMTFGEQNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPETQGLTETYV 69

Query: 61  NIGAGRIVYQDLTRIDKSIREGEFFENETLVAAVRSAKSTGKKLHLYALVSDGGVHSHIN 120
                +   ++   I   +       ++ +       +   ++    +L      +  + 
Sbjct: 70  GNWLAKHGSREKLIIASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLKRLQTDYLDLY 129

Query: 121 HLFAMLDLAKKEDMHDVYIHAFMDGRDVPPDSGQKFIKDLIAKIEEVGVGKIATVSGRYF 180
            +                         +              KI  +GV          +
Sbjct: 130 QVHWPQRPTNCFGKLGYSWTDSAPAVSLLDTLDALAEYQRAGKIRYIGVSNETAFGVMRY 189

Query: 181 AMDRDKRWERVEKAYRAMVYGEGP-KYTDALQAITASYQNSVYDEFVEPSVIVDSEGKPT 239
               DK         +               +         +    +    +        
Sbjct: 190 LHLADKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSCLGFGTLTGKYLNGA 249

Query: 240 ATVESGDSVVFLNFRPDRAIQLSQVFTNSDFRGFDRGPLFPQNLHFVCLTTFSETVQGYV 299
               + +++     R         V    D          P  +    +          +
Sbjct: 250 KPAGARNTLFSRFTRYSGEQTQKAVAAYVDIARRHGLD--PAQMALAFVRRQPFVASTLL 307

Query: 300 AYSPKNLDNTLGEVLVQQNKKQLRIAETEKYPHVTFFFSGGRDEELPGETRILINSPKVA 359
                                                                       
Sbjct: 308                                                              367

Query: 360 TYDLKPEMSXXXXXXXXXXXXXXDRQDAIILNFANPDMVGHSGMLEPTIKAVEVTDECXX 419
                                                                       
Sbjct: 368                                                              427

Query: 420 XXXXXXXXXXXXXXXXXXHGNADMVFDEQ-GRPFTAHTTNPVPFI-VTTENVVLRESGIL 477
                                                                       
Sbjct: 428                                                              487

Query: 478 ADVAPTILDLMGLPQPAEMTGQSMI 502
                                    
Sbjct: 488                           512


  Database: COG
    Posted date:  Aug 3, 2010  9:58 AM
  Number of letters in database: 38,378,431
  Number of sequences in database:  115,334
  
Lambda     K      H
   0.317    0.135    0.391 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 115334
Number of Hits to DB: 35,380,464
Number of extensions: 1407600
Number of successful extensions: 3674
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 3666
Number of HSP's successfully gapped: 2
Length of query: 506
Length of database: 38,378,431
Length adjustment: 111
Effective length of query: 395
Effective length of database: 25,576,357
Effective search space: 10102661015
Effective search space used: 10102661015
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 118 (50.1 bits)