BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.5554.p         (175 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc0937 [LR] COG0494 NTP pyrophosphohydrolases including oxidati...   202   2e-52
BMEI0462 [LR] COG0494 NTP pyrophosphohydrolases including oxidat...   162   4e-40
AGc4093 [LR] COG0494 NTP pyrophosphohydrolases including oxidati...   159   2e-39
CC0407 [LR] COG0494 NTP pyrophosphohydrolases including oxidativ...   146   2e-35
mll2727 [LR] COG0494 NTP pyrophosphohydrolases including oxidati...   145   4e-35

>RSc0937 [LR] COG0494 NTP pyrophosphohydrolases including oxidative damage
           repair enzymes Rso Ralstonia solanacearum
          Length = 202

 Score =  202 bits (515), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 102/177 (57%), Positives = 126/177 (71%), Gaps = 7/177 (3%)

Query: 2   ARMAETRGRFRLASVLIPIVLREQGMTVLFTRRTADLKDHAGQISFPGGRREDYDGSAIE 61
           +R+ +T  + R A+VL+P+V R  G+TVL T+R A L  HAGQISFPGG RE  D  A++
Sbjct: 26  SRLIDTSLKLREAAVLVPLVQRSAGLTVLLTQRNATLSQHAGQISFPGGGRESSDRDAVD 85

Query: 62  TALRETEEEIGLARQHIEVIGSLPDYFTGTGYRVTPVAGLIQPPFEAVGDPREVAEIFEV 121
           TALRET EE+G+  +H+EV+G LPDY TG+G+ V+PV GL+ P F A  DP EVAE+FEV
Sbjct: 86  TALRETVEEVGIGAEHVEVVGRLPDYITGSGFHVSPVVGLLTPGFIARPDPSEVAEVFEV 145

Query: 122 PLAFLMDGVNHQRRSVELPAPVGRRSFYTMPYE-----RYFIWGATAGMLRNLFHFL 173
           PLAFLMD  NH+ R +     V  R FY MPY      RYFIWGATAGMLRNL+H L
Sbjct: 146 PLAFLMDPANHEVRELRWDDRV--RCFYAMPYRRPGGGRYFIWGATAGMLRNLYHLL 200


>BMEI0462 [LR] COG0494 NTP pyrophosphohydrolases including oxidative damage
           repair enzymes Bme Brucella melitensis
          Length = 207

 Score =  162 bits (409), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 82/165 (49%), Positives = 109/165 (66%), Gaps = 2/165 (1%)

Query: 9   GRFRLASVLIPIVLREQGMTVLFTRRTADLKDHAGQISFPGGRREDYDGSAIETALRETE 68
            R R A+VL+P+V R    T+L TRRT  L+ H+GQI+FPGG  +  DG+    ALRE  
Sbjct: 43  ARMRDAAVLVPVVDRGAEATLLLTRRTDTLRKHSGQIAFPGGAIDPEDGTTERAALREAN 102

Query: 69  EEIGLARQHIEVIGSLPDYFTGTGYRVTPVAGLIQPPFEAVGDPREVAEIFEVPLAFLMD 128
           EEIGLA    E+IG+LP Y TG+G+ +TPV  +++ PF+   +P EVA+IFEVPL+FLM+
Sbjct: 103 EEIGLAADRAEIIGNLPRYLTGSGFSITPVLAVVKTPFDVHPNPDEVADIFEVPLSFLMN 162

Query: 129 GVNHQRRSVELPAPVGRRSFYTMPYERYFIWGATAGMLRNLFHFL 173
             NH+R S         R +Y MPY   FIWGATAG++R L+  L
Sbjct: 163 PANHRRESRLFNG--KERFYYAMPYHERFIWGATAGIIRGLYERL 205


>AGc4093 [LR] COG0494 NTP pyrophosphohydrolases including oxidative damage
           repair enzymes Atu Agrobacterium tumefaciens strain C58
           (Cereon)
          Length = 210

 Score =  159 bits (403), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 80/162 (49%), Positives = 108/162 (66%), Gaps = 2/162 (1%)

Query: 10  RFRLASVLIPIVLREQGMTVLFTRRTADLKDHAGQISFPGGRREDYDGSAIETALRETEE 69
           R + A+VLIP++       V+FT+RTA L+ H+GQISFPGG  +  D +  E ALRETEE
Sbjct: 47  RLKDAAVLIPVIDDGNDARVIFTQRTATLRQHSGQISFPGGGIDAEDRTPEEAALRETEE 106

Query: 70  EIGLARQHIEVIGSLPDYFTGTGYRVTPVAGLIQPPFEAVGDPREVAEIFEVPLAFLMDG 129
           EIGL+R  +E +G LPDY +GTG+R+ PV  +++P F+   +P EV E+FEVPL+FLMD 
Sbjct: 107 EIGLSRSFVETVGRLPDYISGTGFRIKPVLSVVRPGFDLTLNPTEVDEVFEVPLSFLMDP 166

Query: 130 VNHQRRSVELPAPVGRRSFYTMPYERYFIWGATAGMLRNLFH 171
            NH R S         R FY MPY   +IWG TAG++R ++ 
Sbjct: 167 ANHGRGSRIFQGK--ERFFYEMPYGERYIWGITAGIVRTIYE 206


>CC0407 [LR] COG0494 NTP pyrophosphohydrolases including oxidative damage
           repair enzymes Ccr Caulobacter vibrioides
          Length = 216

 Score =  146 bits (368), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 81/165 (49%), Positives = 100/165 (60%), Gaps = 2/165 (1%)

Query: 11  FRLASVLIPIVLREQGMTVLFTRRTADLKDHAGQISFPGGRREDYDGSAIETALRETEEE 70
            R A+VL+ +V  + G T+L TRR   L+ H GQI+FPGGR  D   +   TALRE +EE
Sbjct: 46  LRPAAVLVGLVEHDDGPTILLTRRADTLRSHTGQIAFPGGRC-DPGETPWGTALREAQEE 104

Query: 71  IGLARQHIEVIGSLPDYFTGTGYRVTPVAGLIQPPFEAVGDPREVAEIFEVPLAFLMDGV 130
           +GL    + V G L  Y T TG+ VTPV G I P       P EVA++FE P  FLMD  
Sbjct: 105 VGLDPALVTVAGLLHGYQTVTGFHVTPVVGFIDPKATFTPSPEEVADVFETPFDFLMDPA 164

Query: 131 NHQRRSVELPAPVGRRSFYTMPYERYFIWGATAGMLRNLFHFLRS 175
           NHQR+  E+P    RR FY MP+   FIWGATAGMLR+L+  L  
Sbjct: 165 NHQRQHREVPG-GPRRHFYAMPWNDRFIWGATAGMLRSLYEALHD 208


>mll2727 [LR] COG0494 NTP pyrophosphohydrolases including oxidative damage
           repair enzymes Mlo Mesorhizobium loti
          Length = 204

 Score =  145 bits (366), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 78/163 (47%), Positives = 102/163 (62%), Gaps = 2/163 (1%)

Query: 11  FRLASVLIPIVLREQGMTVLFTRRTADLKDHAGQISFPGGRREDYDGSAIETALRETEEE 70
            R A+VLIP++  E   TVL T+R   L++H+GQ++FPGG  +  D S    ALRET EE
Sbjct: 42  LRNAAVLIPVIDHEGEATVLLTKRAEKLRNHSGQVAFPGGTIDATDASPEAAALRETFEE 101

Query: 71  IGLARQHIEVIGSLPDYFTGTGYRVTPVAGLIQPPFEAVGDPREVAEIFEVPLAFLMDGV 130
           IGL +  IE+IG +PDY  G+GYR+ PV G+++P F+   +  EV   FEVPL FLMD V
Sbjct: 102 IGLDQHRIEIIGRMPDYVAGSGYRIAPVLGIVRPGFQLDLNADEVDAAFEVPLRFLMDPV 161

Query: 131 NHQRRSVELPAPVGRRSFYTMPYERYFIWGATAGMLRNLFHFL 173
           NH+R S           FY MPY    IWG TAG++R L+  L
Sbjct: 162 NHKRDSRMWNDL--EWFFYDMPYGDRRIWGVTAGIIRTLYERL 202