BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.5509.p         (88 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YPL114w Non COG                                                        31   0.65 
APE2225 [S] COG3427 Uncharacterized conserved protein Ape Aeropy...    29   2.3  
L177350 [F] COG0152 Phosphoribosylaminoimidazolesuccinocarboxami...    29   2.7  

>YPL114w Non COG
          Length = 139

 Score = 31.2 bits (69), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 4/64 (6%)

Query: 27 ARCGTGSPRKPAMRLA-TASSAMAS---RVSWVAEPMCGKATTLGSRSKGELTGKGSTSN 82
           +  T  P  P+  ++ T SS M+     +S    P+CGKA T   RS   LT   S  N
Sbjct: 2  VQLSTYLPSPPSTNMSCTFSSVMSVCFMTMSATVLPICGKAVTSHLRSNSCLTRVSSFLN 61

Query: 83 TSRP 86
          TSRP
Sbjct: 62 TSRP 65


>APE2225 [S] COG3427 Uncharacterized conserved protein Ape Aeropyrum pernix
          Length = 156

 Score = 29.3 bits (64), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)

Query: 30  GTGSPRKPAMRLATASSAMASRVSWVAE-PMCGKATTLGSR 69
           G GS     +R A   S   SRVSWV E  + G A ++G R
Sbjct: 92  GAGSTLDFTLRFAVEPSGGGSRVSWVFEGNVGGLAASMGGR 132


>L177350 [F] COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide
          (SAICAR) synthase Lla Lactococcus lactis
          Length = 236

 Score = 28.9 bits (63), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 2/33 (6%)

Query: 50 SRVSWVAEPMCGKATTLGSRSKGELTGKGSTSN 82
          S V WV    C +AT L    K ++TGKG+ +N
Sbjct: 21 SEVLWV--EYCDQATALNGARKEQITGKGALNN 51