BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.5503.p         (65 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BS_yqeD [S] COG0398 Uncharacterized conserved protein Bsu Bacill...    27   7.6  

>BS_yqeD [S] COG0398 Uncharacterized conserved protein Bsu Bacillus subtilis
          Length = 208

 Score = 27.3 bits (59), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 12/27 (44%), Positives = 21/27 (77%), Gaps = 2/27 (7%)

Query: 3   EAIFNRGAPSSMALVMGRLVPIMPSAI 29
           EA FN+ A +  A+++GRL+P++PS +
Sbjct: 112 EASFNKNAFT--AVLLGRLIPVIPSLV 136