BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.5498.p         (134 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ECU10g1350 [J] COG1236 Predicted exonuclease of the beta-lactama...    30   1.9  
FN1642 [J] COG0090 Ribosomal protein L2 Fnu Fusobacterium nucleatum    28   3.7  

>ECU10g1350 [J] COG1236 Predicted exonuclease of the beta-lactamase fold
           involved in RNA processing Ecu Encephalitozoon_cuniculi
          Length = 496

 Score = 29.6 bits (65), Expect = 1.9,   Method: Composition-based stats.
 Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 4/38 (10%)

Query: 38  RMKRPKASLPTRLAQPTFKPRRARPMATLVSAPARRRV 75
           RMK  K S+  R   PTF P    P  TL++ P+R  V
Sbjct: 413 RMKVLKRSIEERFGIPTFLP----PNGTLINIPSRSMV 446


>FN1642 [J] COG0090 Ribosomal protein L2 Fnu Fusobacterium nucleatum
          Length = 276

 Score = 28.5 bits (62), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 2/62 (3%)

Query: 37  LRMKRPKASLPTRLAQPTFKPRRARPMATLVSAPARRRVYFS--TSSKGPTSSATSSARA 94
           +  KR K  +P R+A   + P R+  +A L      +R   +     KG   SA S A  
Sbjct: 65  IDFKRNKLDVPARVATIEYDPNRSANIALLFYVDGEKRYILAPKGLKKGDIVSAGSKAEI 124

Query: 95  SP 96
            P
Sbjct: 125 KP 126