BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.5354.p         (158 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SMc02524 [C] COG1905 NADH Sme Sinorhizobium meliloti                  170   1e-42
AGl350 [C] COG1905 NADH Atu Agrobacterium tumefaciens strain C58...   167   8e-42
mll5398 [C] COG1905 NADH Mlo Mesorhizobium loti                       166   1e-41
TM0012 [C] COG1905 NADH Tma Thermotoga maritima                       104   6e-23
PA2640 [C] COG1905 NADH Pae Pseudomonas aeruginosa                    103   2e-22

>SMc02524 [C] COG1905 NADH Sme Sinorhizobium meliloti
          Length = 159

 Score =  170 bits (431), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 76/142 (53%), Positives = 107/142 (75%)

Query: 15  IIAERKHMAGAMLPILHGIQEQVGYIPADAVPMIAGELNVSRAEVHGVISFYHFFRQEPA 74
           I+ E K + G ++PILH IQ++ GY+P +++P+IA ELN+SRAEV+GV++FYH FR+ PA
Sbjct: 17  IVGELKGLEGPLIPILHEIQDEFGYVPEESLPVIARELNLSRAEVYGVVTFYHDFREHPA 76

Query: 75  GQHVVQVCRAEACQARGSEALAEHAQNVLGCGFHETSADGQFTLEPVYCLGQCAIGPNLT 134
           G+HV+++CRAEACQ+ G + LAE A+ +LG  FHET+ DG  TLEPVYCLG C+  P+  
Sbjct: 77  GRHVLKLCRAEACQSMGGDRLAERAKALLGIDFHETTPDGAVTLEPVYCLGLCSCSPSAM 136

Query: 135 LDDELHARVDADKFKRLIQAKR 156
           LD E+HAR+D    + L+   R
Sbjct: 137 LDGEVHARLDETVLEALVAEAR 158


>AGl350 [C] COG1905 NADH Atu Agrobacterium tumefaciens strain C58 (Cereon)
          Length = 184

 Score =  167 bits (423), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 80/149 (53%), Positives = 103/149 (69%)

Query: 8   DVAAVRGIIAERKHMAGAMLPILHGIQEQVGYIPADAVPMIAGELNVSRAEVHGVISFYH 67
           + A V  +I E  H+ G +LPILH +QE+ GYIP  A  +IA  LN+SRAEVHGV++FY 
Sbjct: 35  EAARVSAVINECLHLEGPLLPILHAVQEEFGYIPESAKQIIASALNISRAEVHGVVTFYP 94

Query: 68  FFRQEPAGQHVVQVCRAEACQARGSEALAEHAQNVLGCGFHETSADGQFTLEPVYCLGQC 127
            FR  P G+HV+++CRAEACQ+ G E LAE  +N LG  +HET+ADG  TLEPV+CLG C
Sbjct: 95  DFRDHPQGRHVLKLCRAEACQSMGGEPLAETIKNRLGLEWHETAADGSVTLEPVFCLGLC 154

Query: 128 AIGPNLTLDDELHARVDADKFKRLIQAKR 156
           A  P L LD E+HAR+D D    ++   R
Sbjct: 155 AQAPALMLDGEVHARLDDDCLGNILTEAR 183


>mll5398 [C] COG1905 NADH Mlo Mesorhizobium loti
          Length = 159

 Score =  166 bits (421), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 77/142 (54%), Positives = 104/142 (73%)

Query: 15  IIAERKHMAGAMLPILHGIQEQVGYIPADAVPMIAGELNVSRAEVHGVISFYHFFRQEPA 74
           II E K + G +LPILH IQ++ G++P  A+P+IA  LN+SRAEVHGV++FYH FR  PA
Sbjct: 17  IIQELKGLEGPLLPILHEIQDEFGHVPQAALPVIADGLNLSRAEVHGVVTFYHDFRARPA 76

Query: 75  GQHVVQVCRAEACQARGSEALAEHAQNVLGCGFHETSADGQFTLEPVYCLGQCAIGPNLT 134
           G+HV+++C+AEACQ+ GS+A+A   + +LG GFHET+ DG  TLEPVYCLG CA  P+  
Sbjct: 77  GRHVLKLCQAEACQSMGSDAVAAKIKQLLGIGFHETTRDGSVTLEPVYCLGLCACSPSAM 136

Query: 135 LDDELHARVDADKFKRLIQAKR 156
           LD E+  R+D DK   ++   R
Sbjct: 137 LDGEVIGRLDDDKIDEILAEVR 158


>TM0012 [C] COG1905 NADH Tma Thermotoga maritima
          Length = 176

 Score =  104 bits (260), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 49/136 (36%), Positives = 84/136 (61%), Gaps = 2/136 (1%)

Query: 25  AMLPILHGIQEQVGYIPADAVPMIAGELNVSRAEVHGVISFYHFFRQEPAGQHVVQVCRA 84
           A++ +LH  QE  GY+PAD +  I+ +L+V  ++V+GV++FY+FF  +P G+H ++VC  
Sbjct: 41  ALIQVLHKAQELFGYLPADVLEYISDKLDVPLSKVYGVVTFYNFFSTKPKGKHQIKVCLG 100

Query: 85  EACQARGSEALAEHAQNVLGCGFHETSADGQFTLEPVYCLGQCAIGPNLTLD-DELHARV 143
            AC  +G++ + E     L     E ++DG F++  V CLG C++ P + +D D+ + RV
Sbjct: 101 TACYVKGADRIFERFLEELKVNPDEPTSDGMFSVHGVRCLGACSMAPVVMVDEDDFYGRV 160

Query: 144 DADKFKRLI-QAKREA 158
             D   ++I + KRE 
Sbjct: 161 TPDMVPQIISKYKREG 176


>PA2640 [C] COG1905 NADH Pae Pseudomonas aeruginosa
          Length = 166

 Score =  103 bits (257), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 49/130 (37%), Positives = 76/130 (58%)

Query: 25  AMLPILHGIQEQVGYIPADAVPMIAGELNVSRAEVHGVISFYHFFRQEPAGQHVVQVCRA 84
           A +  L  +Q+Q G++P  A+P I   L +  ++V GV +FY    ++P G+H+++VC +
Sbjct: 35  ASIEALKIVQKQRGWVPDGAIPAIGEVLGIPASDVEGVATFYSQIFRQPVGRHIIRVCDS 94

Query: 85  EACQARGSEALAEHAQNVLGCGFHETSADGQFTLEPVYCLGQCAIGPNLTLDDELHARVD 144
             C   G E++    Q  LG G  +T+ADG+FTL PV CLG C   P L +DD+ H  V 
Sbjct: 95  MVCYIGGHESVVGEIQKQLGIGLGQTTADGRFTLLPVCCLGNCDKAPALMIDDDTHGDVR 154

Query: 145 ADKFKRLIQA 154
            D   +L++A
Sbjct: 155 PDGVAKLLEA 164