BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.5337.p         (71 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YPO1798 [NO] COG1261 Flagellar basal body P-ring biosynthesis pr...    28   4.3  

>YPO1798 [NO] COG1261 Flagellar basal body P-ring biosynthesis protein Ype
          Yersinia pestis
          Length = 232

 Score = 28.5 bits (62), Expect = 4.3,   Method: Composition-based stats.
 Identities = 12/30 (40%), Positives = 13/30 (43%)

Query: 23 KCATATAPTQWPHCRARNVTWPAFMCRWAN 52
          K    T   QWP C A  +T PA    W N
Sbjct: 57 KVVIKTPQNQWPQCDAPEITLPANARPWGN 86