BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.5331.p         (145 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

STM2947 [P] COG0155 Sulfite reductase, beta subunit (hemoprotein...    29   3.8  

>STM2947 [P] COG0155 Sulfite reductase, beta subunit (hemoprotein) Sty
           Salmonella typhimurium LT2
          Length = 570

 Score = 28.9 bits (63), Expect = 3.8,   Method: Composition-based stats.
 Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 4/68 (5%)

Query: 79  TRAAARARCTSSSRASNRRNRR-ASSAASADRAGWVGLEAGAAEFMARSGRRKETARRQD 137
           T A A A  T+     NR +R+ A +  + +R   VGLE   AE   R+G + E  R  +
Sbjct: 282 TLAVAEAVVTTQRDWGNRTDRKNAKTKYTLER---VGLETFKAEVERRAGIKFEPIRPYE 338

Query: 138 GSGPGARV 145
            +G G R+
Sbjct: 339 FTGRGDRI 346