BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.5250.p         (34 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

PAE1752 Non COG                                                        28   6.0  

>PAE1752 Non COG
          Length = 304

 Score = 27.7 bits (60), Expect = 6.0,   Method: Composition-based stats.
 Identities = 12/29 (41%), Positives = 16/29 (55%)

Query: 2   VVTICPRPPETPVAPDAPVPFMTAKRASP 30
           VV    +P +TPV P A +P MT  +  P
Sbjct: 107 VVDALYKPGDTPVRPRAEIPIMTPNKRHP 135