BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.5246.p         (53 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

TVN0258 [R] COG1524 Uncharacterized proteins of the AP superfami...    30   1.0  

>TVN0258 [R] COG1524 Uncharacterized proteins of the AP superfamily Tvo
           Thermoplasma volcanium
          Length = 423

 Score = 30.4 bits (67), Expect = 1.0,   Method: Composition-based stats.
 Identities = 11/26 (42%), Positives = 16/26 (61%)

Query: 24  WPATAAMAATSVLAALIPMAHGALHW 49
           +P+T A A T++   L P+ HG L W
Sbjct: 101 FPSTTAAANTTINTGLAPLEHGLLEW 126