BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.5194.p         (70 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

yddG [GER] COG0697 Permeases of the drug/metabolite transporter ...    28   7.0  
ZyddG [GER] COG0697 Permeases of the drug/metabolite transporter...    28   7.5  
ECs2077 [GER] COG0697 Permeases of the drug/metabolite transport...    28   7.5  

>yddG [GER] COG0697 Permeases of the drug/metabolite transporter (DMT)
          superfamily Eco Escherichia coli K12
          Length = 293

 Score = 27.7 bits (60), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 6/52 (11%)

Query: 7  LVGMEIMAAWMSM-----GISTETGPIGGVSAVCTAS-LMVLMAVSTLRMRK 52
          L+G+  +  W +M     G+S   GP+GG +A+ + S L+++  V   R+R+
Sbjct: 8  LIGLIAIVLWSTMVGLIRGVSEGLGPVGGAAAIYSLSGLLLIFTVGFPRIRQ 59


>ZyddG [GER] COG0697 Permeases of the drug/metabolite transporter (DMT)
          superfamily EcZ Escherichia coli O157:H7 EDL933
          Length = 293

 Score = 27.7 bits (60), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 6/52 (11%)

Query: 7  LVGMEIMAAWMSM-----GISTETGPIGGVSAVCTAS-LMVLMAVSTLRMRK 52
          L+G+  +  W +M     G+S   GP+GG +A+ + S L+++  V   R+R+
Sbjct: 8  LIGLIAIVLWSTMVGLIRGVSEGLGPVGGAAAIYSLSGLLLIFTVGFPRIRQ 59


>ECs2077 [GER] COG0697 Permeases of the drug/metabolite transporter (DMT)
          superfamily Ecs Escherichia coli O157:H7
          Length = 293

 Score = 27.7 bits (60), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 6/52 (11%)

Query: 7  LVGMEIMAAWMSM-----GISTETGPIGGVSAVCTAS-LMVLMAVSTLRMRK 52
          L+G+  +  W +M     G+S   GP+GG +A+ + S L+++  V   R+R+
Sbjct: 8  LIGLIAIVLWSTMVGLIRGVSEGLGPVGGAAAIYSLSGLLLIFTVGFPRIRQ 59