BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.5185.p         (305 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Rv2914c [RTKL] COG0515 Serine/threonine protein kinase Mtu Mycob...    30   7.0  
MT2982 [RTKL] COG0515 Serine/threonine protein kinase MtC Mycoba...    30   7.2  
STM1517 [GER] COG0697 Permeases of the drug/metabolite transport...    30   7.8  

>Rv2914c [RTKL] COG0515 Serine/threonine protein kinase Mtu Mycobacterium
           tuberculosis H37Rv
          Length = 585

 Score = 30.0 bits (66), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 3/60 (5%)

Query: 223 AVVTSAIGTLDETHAFQRGQQAKHGGARDIQATRQFGGRQRLVLTAEFAQQAQATFQAGD 282
           A+VT+  G LD  H  QRG   +     ++  T Q  G QR++L A+F   +Q ++ A +
Sbjct: 116 AIVTAVAGALDYAH--QRGLLHRDVNPANVVLTSQSAGDQRILL-ADFGIASQPSYPAPE 172


>MT2982 [RTKL] COG0515 Serine/threonine protein kinase MtC Mycobacterium
           tuberculosis CDC1551
          Length = 603

 Score = 30.0 bits (66), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 3/60 (5%)

Query: 223 AVVTSAIGTLDETHAFQRGQQAKHGGARDIQATRQFGGRQRLVLTAEFAQQAQATFQAGD 282
           A+VT+  G LD  H  QRG   +     ++  T Q  G QR++L A+F   +Q ++ A +
Sbjct: 134 AIVTAVAGALDYAH--QRGLLHRDVNPANVVLTSQSAGDQRILL-ADFGIASQPSYPAPE 190


>STM1517 [GER] COG0697 Permeases of the drug/metabolite transporter (DMT)
           superfamily Sty Salmonella typhimurium LT2
          Length = 300

 Score = 30.0 bits (66), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 4/71 (5%)

Query: 178 AAIAYHQIAGIADLIAQAVQQRTADLGQFQRSQVFEAQAQHRHAQAVVTSAIGTLDETHA 237
            AI +   AG+A L+ QA    T  LG F    VF  + Q +    +  + IG L    A
Sbjct: 79  CAIKFGMPAGLASLVLQAQAFFTMALGAF----VFSERLQRKQLAGIALAIIGVLVLIEA 134

Query: 238 FQRGQQAKHGG 248
              GQ     G
Sbjct: 135 SLNGQHIAMSG 145