BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.5167.p         (147 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YLR134w [GHR] COG3961 Pyruvate decarboxylase and related thiamin...    32   0.39 

>YLR134w [GHR] COG3961 Pyruvate decarboxylase and related thiamine
           pyrophosphate-requiring enzymes Sce Saccharomyces
           cerevisiae
          Length = 563

 Score = 32.3 bits (72), Expect = 0.39,   Method: Composition-based stats.
 Identities = 33/119 (27%), Positives = 44/119 (36%), Gaps = 10/119 (8%)

Query: 23  LLLPPELV----MAALLTRP---SSPPSHCVAAAAAMRTEAGSARSSAKPCTFMPACCRR 75
           L LP  LV     A LL  P   S  P+   A A  +RT     + +  P     AC  R
Sbjct: 165 LGLPANLVDLNVPAKLLETPIDLSLKPNDAEAEAEVVRTVVELIKDAKNPVILADACASR 224

Query: 76  ATAEASSSCRMSAM---ATLAPAAAMACTNARPRPRAAPVTRMRRPAKRVAVLAADMCL 131
              +A +   M        + P    A     PR     V  + RP  + AV +AD+ L
Sbjct: 225 HDVKAETKKLMDLTQFPVYVTPMGKGAIDEQHPRYGGVYVGTLSRPEVKKAVESADLIL 283