BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.5120.p         (116 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SMb21297 [M] COG4953 Membrane carboxypeptidase/penicillin-bindin...    27   8.6  

>SMb21297 [M] COG4953 Membrane carboxypeptidase/penicillin-binding protein
           PbpC Sme Sinorhizobium meliloti
          Length = 713

 Score = 27.3 bits (59), Expect = 8.6,   Method: Composition-based stats.
 Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 2/31 (6%)

Query: 11  ARRRVHCSNWRPSSGSASTLVMVNSLAMAIT 41
           ARRRV  S W+P  G  STL ++++L  A +
Sbjct: 679 ARRRV--SQWQPDGGGYSTLTVIDALGRAAS 707