BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.5104.p         (130 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BH3674 [V] COG0577 ABC-type antimicrobial peptide transport syst...    28   7.6  

>BH3674 [V] COG0577 ABC-type antimicrobial peptide transport system,
           permease component Bha Bacillus halodurans
          Length = 413

 Score = 27.7 bits (60), Expect = 7.6,   Method: Composition-based stats.
 Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 10/81 (12%)

Query: 30  GQFDLRMAVAEQRDGLRDQHLPDARAGDDVEDAAAV-FRQVG----GQLVDALHGLIHVF 84
           G+FD +  +    +G RD+  PD  A + + D + + FR VG       VD L+G     
Sbjct: 153 GEFDSKNQIILISEGARDELFPDGDAVNQLVDLSGIPFRVVGVFSERTEVDWLYG----- 207

Query: 85  HLMEQLLGFGRGVQPALDAFE 105
              +  +   +GV P L+ F+
Sbjct: 208 GWSQPKIYVPKGVWPLLEGFD 228