BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.5053.p         (59 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CC0156 [L] COG0592 DNA polymerase sliding clamp subunit (PCNA ho...    29   2.1  

>CC0156 [L] COG0592 DNA polymerase sliding clamp subunit (PCNA homolog) Ccr
           Caulobacter vibrioides
          Length = 372

 Score = 29.3 bits (64), Expect = 2.1,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 3/46 (6%)

Query: 9   PNGKIRCPGSILPKRILLPAQRLGTEQRSASDESSRSKSPGHRRFQ 54
           P G +  PG I+P++ +  A+RL     SA +      SP   RF+
Sbjct: 190 PEGAVGIPGVIVPRKTIAEARRL---MESAGETVDLQVSPQKVRFE 232