BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.5043.p         (61 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BH3535_2 [L] COG0863 DNA modification methylase Bha Bacillus hal...    29   3.1  

>BH3535_2 [L] COG0863 DNA modification methylase Bha Bacillus halodurans
          Length = 292

 Score = 28.9 bits (63), Expect = 3.1,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 5/39 (12%)

Query: 22 PVGQGFGGAAGLNVRCSSRVDDEFYQGIFD-----FQIT 55
          P    + GA G+ ++  +  D EFYQ +FD     +Q+T
Sbjct: 47 PYNVDYEGATGMKIKNDNMEDSEFYQFLFDAFVAMYQVT 85