BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.5026.p         (71 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc0253 [R] COG0384 Predicted epimerase, PhzC/PhzF homolog Rso R...    28   6.5  

>RSc0253 [R] COG0384 Predicted epimerase, PhzC/PhzF homolog Rso Ralstonia
           solanacearum
          Length = 285

 Score = 27.7 bits (60), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 29  VTPRPVTLATTPARPT--SWWSLPASAISSPPTWSSLAQSSSM 69
           V PR   L+T PA P       L A A++SPP W  +     M
Sbjct: 117 VPPRAGALSTRPADPAIAGMLGLEADALASPPMWVDVGIEQLM 159