BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.5014.p         (90 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L0222 [O] COG0542 ATPases with chaperone activity, ATP-binding s...    29   3.3  
BH3812 [M] COG0744 Membrane carboxypeptidase (penicillin-binding...    28   5.0  

>L0222 [O] COG0542 ATPases with chaperone activity, ATP-binding subunit
           Lla Lactococcus lactis
          Length = 816

 Score = 28.9 bits (63), Expect = 3.3,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 29/62 (46%)

Query: 4   TGVKVPETTKPRIPPRLCFLSEELATQAAIPLCRNSASILGSRPRNALKDSIAGREPPTA 63
           TG+KVPE+ K   P     +++ +A  +  P   + +S L    R    D + GRE    
Sbjct: 144 TGLKVPESKKAVTPMSKRKMAKGVAENSTTPTLDSVSSDLTEEARLGKLDPMIGREAEID 203

Query: 64  RI 65
           R+
Sbjct: 204 RL 205


>BH3812 [M] COG0744 Membrane carboxypeptidase (penicillin-binding protein)
           Bha Bacillus halodurans
          Length = 687

 Score = 28.1 bits (61), Expect = 5.0,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%)

Query: 7   KVPETTKPRIPPRLCFLSEELATQAAIPLCRNSASILGSRPRNALKDSIAGREPPTA 63
           ++PET +  + PRL F+  +L T    P   +  S+ GS   + +   +AG+   T+
Sbjct: 505 QMPETEQT-LDPRLTFIMADLMTAMFDPSLNDYMSVTGSSVNHLVNRPVAGKSGSTS 560