BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.4958.p         (81 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

MA3445 [R] COG1162 Predicted GTPases Mac Methanosarcina acetivor...    29   2.3  

>MA3445 [R] COG1162 Predicted GTPases Mac Methanosarcina acetivorans
           str.C2A
          Length = 369

 Score = 29.3 bits (64), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 4/60 (6%)

Query: 23  IITSPPAGSRAQGNVMPE----VRRSNSDDFRHQLLLLALNCAWSAASMSPPVNLRRLRR 78
           ++  P  GSR   N++P      R +  D    QL+   L+  +   S+   +NLRRL R
Sbjct: 85  LLDQPETGSRMVVNILPRRTCLSRGAAGDGGGEQLIAANLDTIFIVTSVGKDLNLRRLER 144