BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.4951.p         (54 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ML1144 [C] COG0224 F0F1-type ATP synthase, gamma subunit Mle Myc...    30   1.1  
Rv1309 [C] COG0224 F0F1-type ATP synthase, gamma subunit Mtu Myc...    29   2.2  
MT1349 [C] COG0224 F0F1-type ATP synthase, gamma subunit MtC Myc...    29   2.2  

>ML1144 [C] COG0224 F0F1-type ATP synthase, gamma subunit Mle Mycobacterium
           leprae
          Length = 298

 Score = 30.4 bits (67), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 16/47 (34%), Positives = 26/47 (55%)

Query: 6   ASRPQAIKSSPSVSPPLATLRSENGHRERGSGVPRSIFKAVGGKNTL 52
           ASR +A+KS+   +  L    +   +RER + + + I + VGG N L
Sbjct: 248 ASRQRAMKSATDNADDLIKALTLEANRERQAQITQEISEIVGGANAL 294


>Rv1309 [C] COG0224 F0F1-type ATP synthase, gamma subunit Mtu Mycobacterium
           tuberculosis H37Rv
          Length = 305

 Score = 29.3 bits (64), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 16/47 (34%), Positives = 26/47 (55%)

Query: 6   ASRPQAIKSSPSVSPPLATLRSENGHRERGSGVPRSIFKAVGGKNTL 52
           ASR +A+KS+   +  L    +   +RER + + + I + VGG N L
Sbjct: 255 ASRQRAMKSATDNADDLIKALTLMANRERQAQITQEISEIVGGANAL 301


>MT1349 [C] COG0224 F0F1-type ATP synthase, gamma subunit MtC Mycobacterium
           tuberculosis CDC1551
          Length = 305

 Score = 29.3 bits (64), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 16/47 (34%), Positives = 26/47 (55%)

Query: 6   ASRPQAIKSSPSVSPPLATLRSENGHRERGSGVPRSIFKAVGGKNTL 52
           ASR +A+KS+   +  L    +   +RER + + + I + VGG N L
Sbjct: 255 ASRQRAMKSATDNADDLIKALTLMANRERQAQITQEISEIVGGANAL 301