BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.4948.p         (162 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Cgl2444_2 [I] COG4981 Enoyl reductase domain of yeast-type FAS1 ...    32   0.53 
Z2700 Non COG                                                          32   0.59 
ECs2379 Non COG                                                        32   0.59 
XF2721 [V] COG0610 Type I site-specific restriction-modification...    32   0.79 
all2912 [E] COG0410 ABC-type branched-chain amino acid transport...    32   0.83 

>Cgl2444_2 [I] COG4981 Enoyl reductase domain of yeast-type FAS1 Cgl
           Corynebacterium glutamicum
          Length = 688

 Score = 32.0 bits (71), Expect = 0.53,   Method: Composition-based stats.
 Identities = 18/45 (40%), Positives = 25/45 (55%)

Query: 62  RSDAITGTGDDVVIAPQIADIAGFIHVAQVTGQQEVTGELLARGV 106
           RSD++  + DD   A Q+A I G + VA +T   E   +LL R V
Sbjct: 468 RSDSLWQSHDDRYTADQVAIIPGVVAVAGITKANEPVADLLDRFV 512


>Z2700 Non COG
          Length = 215

 Score = 32.0 bits (71), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 12/65 (18%)

Query: 72  DVVIAPQIADIAGFIHVAQVTGQQEVTGELLARGVFIAP---VAQEHYRVRCA----DGD 124
           D V  P+ A+I     +A+   Q  V G+L+AR VF++P   VA+E   V       +GD
Sbjct: 34  DTVTEPEPAEI-----LAEFIRQHSVAGQLVARAVFLSPPYSVAEEELSVLLENIKQNGD 88

Query: 125 VAHLA 129
            A +A
Sbjct: 89  YADIA 93


>ECs2379 Non COG
          Length = 215

 Score = 32.0 bits (71), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 12/65 (18%)

Query: 72  DVVIAPQIADIAGFIHVAQVTGQQEVTGELLARGVFIAP---VAQEHYRVRCA----DGD 124
           D V  P+ A+I     +A+   Q  V G+L+AR VF++P   VA+E   V       +GD
Sbjct: 34  DTVTEPEPAEI-----LAEFIRQHSVAGQLVARAVFLSPPYSVAEEELSVLLENIKQNGD 88

Query: 125 VAHLA 129
            A +A
Sbjct: 89  YADIA 93


>XF2721 [V] COG0610 Type I site-specific restriction-modification system, R
           (restriction) subunit and related helicases Xfa Xylella
           fastidiosa 9a5c
          Length = 1025

 Score = 31.6 bits (70), Expect = 0.79,   Method: Composition-based stats.
 Identities = 30/107 (28%), Positives = 44/107 (41%), Gaps = 21/107 (19%)

Query: 4   QLRA-HVLLQLRHQCGSWRMTLLEHDKSLHHLGTQRILDPHHRRDAHGRMAHQAFLDRRR 62
           QLR    LL+  H  G  R  L++H                 + +    +AHQ    RR+
Sbjct: 300 QLRTVRALLRRAHSDGVGRRYLIQHSAG------------SGKSNTIAWLAHQLVELRRK 347

Query: 63  SDAITGTGDDVVIA-------PQIAD-IAGFIHVAQVTGQQEVTGEL 101
            D +T   D +++         QIAD I G+ HVA + G  +   EL
Sbjct: 348 DDPMTPQFDSIIVITDRRALDTQIADTIKGYDHVAAIFGHSDNAQEL 394


>all2912 [E] COG0410 ABC-type branched-chain amino acid transport systems,
           ATPase component Nos Nostoc sp. PCC 7120
          Length = 247

 Score = 31.6 bits (70), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 1/59 (1%)

Query: 24  LLEHDKSLHHLGTQRILDPHHRRDAHGRMAHQAFLDRRRSDAITGTGDDVVIAPQIADI 82
           + E  K ++  GT  IL   + R A   MA + ++     DAI+G G +++  P++A++
Sbjct: 182 VFEQVKQINQEGTAIILVEQNARKAL-EMADRGYVLESGRDAISGPGQELLTDPKVAEL 239