BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.4916.p         (96 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XFa0041 Non COG                                                        29   3.3  
XF2050 Non COG                                                         28   3.6  
PH1975_1 [C] COG1155 Archaeal/vacuolar-type H+-ATPase subunit A ...    28   3.6  
Rv3623 [S] COG2968 Uncharacterized conserved protein Mtu Mycobac...    28   4.9  
MT3725 [S] COG2968 Uncharacterized conserved protein MtC Mycobac...    28   4.9  

>XFa0041 Non COG
          Length = 158

 Score = 28.9 bits (63), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 1/44 (2%)

Query: 20 FAQSTVTTEAARDQANLNAHNNYPVVKFQSSKTRADV-LAELQA 62
          F  S V   A    A  N H NY  V  +++KT ADV +A+L A
Sbjct: 4  FMMSVVMLAALTSCATQNMHGNYAAVSIEANKTMADVTVAQLVA 47


>XF2050 Non COG
          Length = 158

 Score = 28.5 bits (62), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 1/44 (2%)

Query: 20 FAQSTVTTEAARDQANLNAHNNYPVVKFQSSKTRADV-LAELQA 62
          F  S V   A    A  N H NY  V  +++KT ADV +A+L A
Sbjct: 4  FMMSVVMLAALTSCATQNMHGNYAAVSIEANKTMADVTVAQLVA 47


>PH1975_1 [C] COG1155 Archaeal/vacuolar-type H+-ATPase subunit A Pho
          Pyrococcus horikoshii
          Length = 240

 Score = 28.5 bits (62), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 4/52 (7%)

Query: 44 VVKFQSSKTRADVLAELQAARLGEPMQNSGAKPSVSDNSTQGQALDSSLYNG 95
          +++ +  K    V  E    R GEP+  +GA  SV      G  L +S+Y+G
Sbjct: 40 IIRLEGDKAVIQVYEETAGVRPGEPVVGTGASLSVE----LGPGLLTSIYDG 87


>Rv3623 [S] COG2968 Uncharacterized conserved protein Mtu Mycobacterium
           tuberculosis H37Rv
          Length = 240

 Score = 28.1 bits (61), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 3/34 (8%)

Query: 47  FQSSKTRADVLAELQAARLGEPM---QNSGAKPS 77
           FQ +K RAD  A+L   RLG+ +   + SGA P+
Sbjct: 174 FQDAKNRADQYAQLSGLRLGKVISISEASGAAPT 207


>MT3725 [S] COG2968 Uncharacterized conserved protein MtC Mycobacterium
           tuberculosis CDC1551
          Length = 240

 Score = 28.1 bits (61), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 3/34 (8%)

Query: 47  FQSSKTRADVLAELQAARLGEPM---QNSGAKPS 77
           FQ +K RAD  A+L   RLG+ +   + SGA P+
Sbjct: 174 FQDAKNRADQYAQLSGLRLGKVISISEASGAAPT 207