BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.4655.p (249 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value MA2133 [S] COG3177 Uncharacterized conserved protein Mac Methano... 179 7e-45 mlr2757 [S] COG3177 Uncharacterized conserved protein Mlo Mesorh... 151 1e-36 pli0008 [S] COG3177 Uncharacterized conserved protein Lin Lister... 87 5e-17 YPO0874 [S] COG3177 Uncharacterized conserved protein Ype Yersin... 86 1e-16 PM1770 [S] COG3177 Uncharacterized conserved protein Pmu Pasteur... 83 5e-16 >MA2133 [S] COG3177 Uncharacterized conserved protein Mac Methanosarcina acetivorans str.C2A Length = 326 Score = 179 bits (453), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 101/239 (42%), Positives = 146/239 (61%), Gaps = 4/239 (1%) Query: 7 LAAVDAEKARLDAARPLSPHTVASLREKLMLEWTYHSNAIEGNTLTLRETKVVLEG-ITV 65 LA ++ + +L++ RP+ + L +++ L TYHSNAIEGNTLTL+ETK+VLE +T+ Sbjct: 30 LARINEKMKQLNSMRPIPADALGRLHDEMRLVHTYHSNAIEGNTLTLQETKLVLEEELTI 89 Query: 66 GGKSLREHFEAINHRDAILLVEQIVADQEPLSERHIKDLHSLVLKGIDAEQAGRYRRENV 125 GGKSLREH EA N+ A + ++ + + I+++H +V +GI E AGRYR N+ Sbjct: 90 GGKSLREHLEATNNAKAFDRMGELAKKKRAIDHVIIQEIHEIVTRGI-LEDAGRYRTRNI 148 Query: 126 VIAGASTTPPDFLHLNDEMRHLLDWYQQADPLHPVARAAQLHTRFVKIHPFVDGNGRTGR 185 I GA PPD+ + M L+ ++ HP+ A+ LH RFV+IHPF DGNGR R Sbjct: 149 RITGAVKAPPDWSKIVKLMDELIQKIAESKK-HPIETASFLHHRFVEIHPFSDGNGRAAR 207 Query: 186 LLLNLELMKSGYPPAVIRKEDRLAYYDALDEACLNANHDAITALVADSVLRSLRLYLDL 244 LL NL L+ YPP V++KED YY +L A + N + +A +V +L LYL + Sbjct: 208 LLTNLYLIARDYPPVVLKKEDWGKYYKSL-RAADSGNLEPFANFIAKAVDENLTLYLSI 265 >mlr2757 [S] COG3177 Uncharacterized conserved protein Mlo Mesorhizobium loti Length = 263 Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 101/245 (41%), Positives = 133/245 (54%), Gaps = 9/245 (3%) Query: 5 TRLAAVDAEKARLDAARPLS-PHTVASLREKLMLEWTYHSNAIEGNTLTLRETKVVLE-G 62 T V A+K +LDA R P + L ++ TY SNAIEGNTLT ET +VLE G Sbjct: 2 TPAGTVFAKKRQLDALRKRGRPGALDGLEHSQRIDITYTSNAIEGNTLTAGETALVLEKG 61 Query: 63 ITVGGKSLREHFEAINHRDAILLVEQIVADQE-PLSERHIKDLHSLVLKGIDAEQAGRYR 121 IT+ GK L++H EA++H A+ V +I + P+ E I++LH LV+ E AGRY Sbjct: 62 ITISGKPLKDHLEAVDHARALNWVLEIASQSSTPIVEADIRNLHHLVVANTKPEIAGRYA 121 Query: 122 RENVVI---AGASTTPPDFLHLNDEMRHLLDWYQQADPLHPVARAAQLHTRFVKIHPFVD 178 + AG PP + + M W A + A + H R V IHPF D Sbjct: 122 DSARYVNTDAGVYDFPPP-MDVPALMERFCQWLGTAR--NTPQTAFEAHRRLVDIHPFND 178 Query: 179 GNGRTGRLLLNLELMKSGYPPAVIRKEDRLAYYDALDEACLNANHDAITALVADSVLRSL 238 GNGRT RLL+NL L ++GYPP IR EDR AY AL+ A H A L+ D + ++L Sbjct: 179 GNGRTARLLMNLVLARAGYPPVAIRPEDRPAYIAALETAQRGGGHAAFDRLLFDRLDQTL 238 Query: 239 RLYLD 243 +YLD Sbjct: 239 DMYLD 243 >pli0008 [S] COG3177 Uncharacterized conserved protein Lin Listeria innocua Length = 254 Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 59/206 (28%), Positives = 103/206 (50%), Gaps = 16/206 (7%) Query: 33 EKLMLEWTYHSNAIEGNTLTLRET-KVVLEGITVGGKS--LREHFEAINHRDAILLVEQI 89 + +++ +HS+AIEGNT++L +T ++L G +S LRE +E NH A V + Sbjct: 13 QDVLVRLAHHSSAIEGNTISLADTVSIILHNKVTGKESYDLREIYEVKNHEQAFAYVMEE 72 Query: 90 VADQEPLSERHIKDLHSLVLKGIDAEQAGRYRRENVVIAGA-------STTPPDFLHLND 142 + P+S IK +H+ + + + G ++ I GA TP D Sbjct: 73 IEALRPISVPTIKQIHAYLTDRLQYDH-GEFKASANAILGADFQTASPQETPLLVQQWVD 131 Query: 143 EMRHLLDWYQQADPLHP-----VARAAQLHTRFVKIHPFVDGNGRTGRLLLNLELMKSGY 197 + + L ++++ P + + H F +IHPF DGNGRTGR+++N LM++ + Sbjct: 132 NVNYRLGTHEESLEKEPSKDDKLETILESHIAFERIHPFSDGNGRTGRMVMNYLLMENDF 191 Query: 198 PPAVIRKEDRLAYYDALDEACLNANH 223 PP +I+ E++ Y L ++ H Sbjct: 192 PPLIIKSEEKAVYMTYLANQDVSGFH 217 >YPO0874 [S] COG3177 Uncharacterized conserved protein Ype Yersinia pestis Length = 380 Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 69/213 (32%), Positives = 105/213 (49%), Gaps = 21/213 (9%) Query: 25 PHTVASLREKLMLEWTYHSNAIEGNTLTLR---ETKVVLEGITVGGKSLREHFEAINHRD 81 P A L+ + + S IEGN TL E+KV EG L+E I H Sbjct: 41 PLLFAQLKSIFHMLESLGSARIEGNHTTLADYVESKV--EGAEDSTDQLKE-IGNIEH-- 95 Query: 82 AILLVEQIVADQEPLSERHIKDLHSLVLKGIDAE---QAGRYRRENVVIAGASTTPPDFL 138 A+ +++ + E ++E +++LH++ + G++ E G YR V IA ++ PP+F+ Sbjct: 96 AMNFIDEHLHAGEDITEYFVRELHAMTVNGLEREGDKTPGAYRSHGVSIAQSTHLPPEFI 155 Query: 139 HLNDEMRHLLDWYQQAD-PLHPVARAAQLHTRFVKIHPFVDGNGRTGRLLLNLELMKSGY 197 H+ M+ L+ + +AD P + + + A H RF IHPF +GNGRT RLL L+K G+ Sbjct: 156 HVPAYMQELVGFMNRADAPKYDLMKVALAHHRFGWIHPFGNGNGRTVRLLTYSLLIKYGF 215 Query: 198 ---------PPAVIRKEDRLAYYDALDEACLNA 221 P + DR YY L EA A Sbjct: 216 NVKTSGRVLNPTAVFCNDRERYYSMLAEADTGA 248 >PM1770 [S] COG3177 Uncharacterized conserved protein Pmu Pasteurella multocida Length = 382 Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 71/220 (32%), Positives = 106/220 (48%), Gaps = 20/220 (9%) Query: 36 MLEWTYHSNAIEGNTLTLRE-TKVVLEGITVGGKSLREHFEAINHRDAILLVEQIVADQE 94 MLE + S IEGN TL + + L+ T + L E N +A+ +++ + E Sbjct: 54 MLE-SLGSARIEGNHTTLADYVESHLDSQTTSSEQLEE---IRNIENAMRFIDEHLKVGE 109 Query: 95 PLSERHIKDLHSLVLKGIDAE---QAGRYRRENVVIAGASTTPPDFLHLNDEMRHLLDWY 151 P+SE IK+LH+L + G+ E G+YR V IA +S PP+ + + M L+++ Sbjct: 110 PISELFIKELHALTVTGLAKEGDKTPGQYRTHQVAIAQSSHLPPESIFVPAYMGELVEFI 169 Query: 152 QQAD-PLHPVARAAQLHTRFVKIHPFVDGNGRTGRLLLNLELMKSGY---------PPAV 201 D P + + + A H RF IHPF +GNGRT RLL L+K G+ P Sbjct: 170 NNNDKPKYDLMKIALAHHRFGWIHPFGNGNGRTVRLLTYALLVKYGFNVQAGGRVLNPTA 229 Query: 202 IRKEDRLAYYDALDEACLNANHD--AITALVADSVLRSLR 239 + DR YY+ L +A D A V + R L+ Sbjct: 230 VFCSDRNRYYEMLSQADKGTEEDLEAWCTYVLSGISRELQ 269