BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.4613.p         (114 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc2033 [E] COG0832 Urea amidohydrolase (urease) beta subunit Rs...   161   4e-40
BMEI1653 [E] COG0832 Urea amidohydrolase (urease) beta subunit B...   148   3e-36
PA4867 [E] COG0832 Urea amidohydrolase (urease) beta subunit Pae...   147   8e-36
msl4944 [E] COG0832 Urea amidohydrolase (urease) beta subunit Ml...   146   1e-35
sll0420 [E] COG0832 Urea amidohydrolase (urease) beta subunit Sy...   144   4e-35

>RSc2033 [E] COG0832 Urea amidohydrolase (urease) beta subunit Rso Ralstonia
           solanacearum
          Length = 101

 Score =  161 bits (407), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 78/101 (77%), Positives = 88/101 (87%)

Query: 1   MIPGEMLVEPGDIELNTGRPTVTVTVANSGDRPIQVGSHFHFYETNPALLFEREAGYGMR 60
           MIPGE+L + GD+ELN GRPT+TVTVAN+GDRP+Q+GSH+HF+E N AL F+REA  G R
Sbjct: 1   MIPGELLPQDGDLELNAGRPTLTVTVANTGDRPVQIGSHYHFHEVNDALRFDREATRGYR 60

Query: 61  LNIAAGTAVRFEPGQERTVELVALAGDRRVYGFNALVMGKL 101
           LNIAAGTAVRFEPGQERTVELVALAGDR VYGF   VMGKL
Sbjct: 61  LNIAAGTAVRFEPGQERTVELVALAGDRVVYGFAGRVMGKL 101


>BMEI1653 [E] COG0832 Urea amidohydrolase (urease) beta subunit Bme Brucella
           melitensis
          Length = 101

 Score =  148 bits (373), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 70/101 (69%), Positives = 81/101 (80%)

Query: 1   MIPGEMLVEPGDIELNTGRPTVTVTVANSGDRPIQVGSHFHFYETNPALLFEREAGYGMR 60
           MIPGE++   GDIELN G+PTVT+ VAN+GDRPIQVGSHFHFYE N AL F+RE   G R
Sbjct: 1   MIPGEIITLEGDIELNQGQPTVTMRVANTGDRPIQVGSHFHFYEVNAALSFDREKARGQR 60

Query: 61  LNIAAGTAVRFEPGQERTVELVALAGDRRVYGFNALVMGKL 101
           L+IAAGTAVRFEPGQER V LV + G R +YGF  ++MGKL
Sbjct: 61  LDIAAGTAVRFEPGQERDVTLVPIRGHREIYGFRQMIMGKL 101


>PA4867 [E] COG0832 Urea amidohydrolase (urease) beta subunit Pae
           Pseudomonas aeruginosa
          Length = 101

 Score =  147 bits (370), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 71/101 (70%), Positives = 81/101 (80%)

Query: 1   MIPGEMLVEPGDIELNTGRPTVTVTVANSGDRPIQVGSHFHFYETNPALLFEREAGYGMR 60
           MIPGE  ++PGDIELN GR T+ ++VAN+GDRPIQVGSH+HF+E N AL F+R A  GMR
Sbjct: 1   MIPGEYDIQPGDIELNAGRRTLALSVANTGDRPIQVGSHYHFFEVNDALAFDRPATRGMR 60

Query: 61  LNIAAGTAVRFEPGQERTVELVALAGDRRVYGFNALVMGKL 101
           LNIAAGTAVRFEPGQ R VELV + G RRVYGF   VMG L
Sbjct: 61  LNIAAGTAVRFEPGQSREVELVEIGGGRRVYGFAGRVMGDL 101


>msl4944 [E] COG0832 Urea amidohydrolase (urease) beta subunit Mlo
           Mesorhizobium loti
          Length = 101

 Score =  146 bits (368), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 72/101 (71%), Positives = 80/101 (79%)

Query: 1   MIPGEMLVEPGDIELNTGRPTVTVTVANSGDRPIQVGSHFHFYETNPALLFEREAGYGMR 60
           MIPGE++   GDIELN G PTVT+ VANSGDRPIQVGSH+HF+ETN  L F+RE   GMR
Sbjct: 1   MIPGEIIPVQGDIELNKGLPTVTLKVANSGDRPIQVGSHYHFFETNEGLKFDREQTRGMR 60

Query: 61  LNIAAGTAVRFEPGQERTVELVALAGDRRVYGFNALVMGKL 101
           L+IAAGTA+RFEPGQER V LV L G R VYGF   VMGKL
Sbjct: 61  LDIAAGTAMRFEPGQERDVTLVPLGGKREVYGFQQKVMGKL 101


>sll0420 [E] COG0832 Urea amidohydrolase (urease) beta subunit Syn
           Synechocystis
          Length = 105

 Score =  144 bits (364), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 68/102 (66%), Positives = 79/102 (77%)

Query: 1   MIPGEMLVEPGDIELNTGRPTVTVTVANSGDRPIQVGSHFHFYETNPALLFEREAGYGMR 60
           MIPGE++   GDIELN GR T T+ VAN+GDRPIQVGSH+HFYE N AL F+R+   GMR
Sbjct: 4   MIPGEIITPEGDIELNVGRSTCTINVANTGDRPIQVGSHYHFYEVNAALQFDRDLAKGMR 63

Query: 61  LNIAAGTAVRFEPGQERTVELVALAGDRRVYGFNALVMGKLK 102
           L+I AGTAVRFEPG E+ V LVA AG R +YGFN LV G L+
Sbjct: 64  LDIPAGTAVRFEPGDEKNVNLVAYAGSREIYGFNGLVNGPLE 105