BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.4610.p (232 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value YPO1191 [E] COG0410 ABC-type branched-chain amino acid transport... 301 9e-82 PA4862 [E] COG0410 ABC-type branched-chain amino acid transport ... 301 1e-81 RSc2037 [E] COG0410 ABC-type branched-chain amino acid transport... 281 9e-76 AGc4373 [E] COG0410 ABC-type branched-chain amino acid transport... 258 7e-69 mll0756 Non COG 255 5e-68 >YPO1191 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Ype Yersinia pestis Length = 232 Score = 301 bits (770), Expect = 9e-82, Method: Compositional matrix adjust. Identities = 140/232 (60%), Positives = 187/232 (80%) Query: 1 MLQVNELNQYYGAAHTLRGVSLDVQKGKVLSLLGRNGVGKTTLLKCLMGVLPVARGNVMF 60 MLQVNEL+QYYG +H LRG++ + + G+V LLGRNGVGKTTLLKCL+G++P+ G++ + Sbjct: 1 MLQVNELDQYYGGSHILRGLTFEARVGEVTCLLGRNGVGKTTLLKCLIGLVPIKNGSITW 60 Query: 61 EGQDITKLKPHQRAKLGIAYVPQGREIFARLTVEENMLMGMATLSGRRASTIKGEVYELF 120 EG++I+ PHQR K GIAYVPQGREIF RLTVEEN+L+G++ G ++ ++ +Y+LF Sbjct: 61 EGKNISHQSPHQRVKEGIAYVPQGREIFPRLTVEENILLGLSRFPGSQSKSVPEHIYQLF 120 Query: 121 PVLKEMLHRRGGDLSGGQQQQLAIARALLAEPKLIILDEPTEGIQPSIIKDIGRVISLLR 180 PVL+EM HRRGGDLSGGQQQQLAI RAL +P+L+ILDEPTEGIQPS+IK+IG VI L Sbjct: 121 PVLQEMKHRRGGDLSGGQQQQLAIGRALACQPRLLILDEPTEGIQPSVIKEIGGVIKKLA 180 Query: 181 QRGDIGILLCEQYFDFARELADTFVVMSRGEVVAAGTQDQMDGEDVKKHLAV 232 +GD+ ILL EQ++DFA ELAD ++VMSRG++V G M+ +DV++ +A+ Sbjct: 181 AQGDMAILLVEQFYDFAAELADNYLVMSRGKIVQRGLGIDMEHDDVRRLVAI 232 >PA4862 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Pae Pseudomonas aeruginosa Length = 232 Score = 301 bits (770), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 143/232 (61%), Positives = 183/232 (78%) Query: 1 MLQVNELNQYYGAAHTLRGVSLDVQKGKVLSLLGRNGVGKTTLLKCLMGVLPVARGNVMF 60 MLQV++L+QYYG +H LRG+S + + G+V LLGRNGVGKTTLL+CLMG++P G V + Sbjct: 1 MLQVDKLHQYYGGSHILRGLSFEAKVGEVTCLLGRNGVGKTTLLRCLMGLVPAREGQVAW 60 Query: 61 EGQDITKLKPHQRAKLGIAYVPQGREIFARLTVEENMLMGMATLSGRRASTIKGEVYELF 120 EG+ +T L+PHQR + GIAYVPQGREIF RLTVEEN+LMG++ S R A + +YELF Sbjct: 61 EGRSLTGLRPHQRVRAGIAYVPQGREIFPRLTVEENLLMGLSRFSARDARAVPDFIYELF 120 Query: 121 PVLKEMLHRRGGDLSGGQQQQLAIARALLAEPKLIILDEPTEGIQPSIIKDIGRVISLLR 180 PVL+EM RRGGDLSGGQQQQLAI RAL ++P+L+ILDEPTEGIQPS+IK+IG V+ L Sbjct: 121 PVLREMKQRRGGDLSGGQQQQLAIGRALASQPRLLILDEPTEGIQPSVIKEIGAVVRSLA 180 Query: 181 QRGDIGILLCEQYFDFARELADTFVVMSRGEVVAAGTQDQMDGEDVKKHLAV 232 RGD+ ILL EQ++DFA ELAD ++VM+RGE+V G M+ E V+ +A+ Sbjct: 181 ARGDMAILLVEQFYDFAAELADQYLVMARGEIVQQGRGRDMESEGVRGLVAI 232 >RSc2037 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Rso Ralstonia solanacearum Length = 230 Score = 281 bits (719), Expect = 9e-76, Method: Compositional matrix adjust. Identities = 141/233 (60%), Positives = 176/233 (75%), Gaps = 4/233 (1%) Query: 1 MLQVNELNQYYGAAHTLRGVSLDVQKGKVLSLLGRNGVGKTTLLKCLMGVLPVARGNVMF 60 MLQ+ +LNQYYG +H LR VS +V GK+ +LLGRNGVGKTTLLKCLMGVLP G + + Sbjct: 1 MLQIQQLNQYYGGSHILRNVSFEVPAGKLTALLGRNGVGKTTLLKCLMGVLPATSGTIDW 60 Query: 61 EGQDITKLKPHQRAKLGIAYVPQGREIFARLTVEENMLMGMATLSGRRA-STIKGEVYEL 119 EG+ I KL ++R G+AYVPQGREIF RLTVEEN+L+G A RRA S + +Y L Sbjct: 61 EGRAIHKLPAYERVSRGLAYVPQGREIFPRLTVEENLLIGAAA---RRAPSGVPDSIYAL 117 Query: 120 FPVLKEMLHRRGGDLSGGQQQQLAIARALLAEPKLIILDEPTEGIQPSIIKDIGRVISLL 179 FPVL +M RRGGDLSGGQQQQLAI RAL++EP+L+ILDEPTEGIQPS+I++IGR + L Sbjct: 118 FPVLAQMKGRRGGDLSGGQQQQLAIGRALMSEPRLLILDEPTEGIQPSVIQEIGRTLRRL 177 Query: 180 RQRGDIGILLCEQYFDFARELADTFVVMSRGEVVAAGTQDQMDGEDVKKHLAV 232 + +LL EQY+DFAR +AD +VVM RGEV+A G MD + V++ +AV Sbjct: 178 VDEFGMSVLLVEQYYDFARRIADRYVVMRRGEVIAQGDGADMDADGVRELVAV 230 >AGc4373 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 231 Score = 258 bits (659), Expect = 7e-69, Method: Compositional matrix adjust. Identities = 127/232 (54%), Positives = 163/232 (70%), Gaps = 1/232 (0%) Query: 1 MLQVNELNQYYGAAHTLRGVSLDVQKGKVLSLLGRNGVGKTTLLKCLMGVLPVARGNVMF 60 ML V +N +YGAA LRGVSL + GK+ +LGRNGVGK++LL+ + G P + G++ F Sbjct: 1 MLTVENINLHYGAAQALRGVSLKAEMGKITCVLGRNGVGKSSLLRAVTGQQPTSAGSISF 60 Query: 61 EGQDITKLKPHQRAKLGIAYVPQGREIFARLTVEENMLMGMATLSGRRASTIKGEVYELF 120 +G + L P+ RAK G+ YVPQGREIF L+V+EN+ G A L R+ I +++ LF Sbjct: 61 DGAPLDGLAPYHRAKRGVGYVPQGREIFPLLSVQENLESGYAPLP-RKERFIPDDIFSLF 119 Query: 121 PVLKEMLHRRGGDLSGGQQQQLAIARALLAEPKLIILDEPTEGIQPSIIKDIGRVISLLR 180 PVL+ ML RRGGDLSGGQQQQLAI RAL+ PK+++LDEPTEGIQPSIIKDIGR I LR Sbjct: 120 PVLQSMLGRRGGDLSGGQQQQLAIGRALVTRPKILVLDEPTEGIQPSIIKDIGRAIKYLR 179 Query: 181 QRGDIGILLCEQYFDFARELADTFVVMSRGEVVAAGTQDQMDGEDVKKHLAV 232 + ILL EQY DF RELAD +M RGE+V G + +D + ++HL V Sbjct: 180 DSTGMAILLVEQYLDFCRELADYVYIMDRGEIVHEGLAETLDTPEARRHLTV 231 >mll0756 Non COG Length = 231 Score = 255 bits (652), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 130/232 (56%), Positives = 163/232 (70%), Gaps = 1/232 (0%) Query: 1 MLQVNELNQYYGAAHTLRGVSLDVQKGKVLSLLGRNGVGKTTLLKCLMGVLPVARGNVMF 60 ML+V+ +YGAA LRGVSL GK+ +LGRNGVGKT+L++ ++G + G+V F Sbjct: 1 MLEVSNATLHYGAAQALRGVSLKAGAGKITCVLGRNGVGKTSLMRSIVGHHRLTSGSVAF 60 Query: 61 EGQDITKLKPHQRAKLGIAYVPQGREIFARLTVEENMLMGMATLSGRRASTIKGEVYELF 120 EG+ + + + RA+ GIA+VPQGREIF LTV EN+ G A L R + V+ELF Sbjct: 61 EGKALDRSAAYDRARSGIAFVPQGREIFPLLTVRENLESGFAPLK-RADRNVPAHVFELF 119 Query: 121 PVLKEMLHRRGGDLSGGQQQQLAIARALLAEPKLIILDEPTEGIQPSIIKDIGRVISLLR 180 PVLK+ML RRGGDLSGGQQQQLAI RAL+ PKL++LDEPTEGIQPSIIKDIGR I LR Sbjct: 120 PVLKQMLGRRGGDLSGGQQQQLAIGRALVMRPKLLVLDEPTEGIQPSIIKDIGRAIRFLR 179 Query: 181 QRGDIGILLCEQYFDFARELADTFVVMSRGEVVAAGTQDQMDGEDVKKHLAV 232 + I +LL EQY DF RELAD +M RG++V G + +D DV+K L V Sbjct: 180 DQAGIAVLLVEQYLDFCRELADEVNIMDRGQIVHTGPAEDLDRADVRKFLTV 231