BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.4571.p         (168 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc0260 [S] COG2606 Uncharacterized conserved protein Rso Ralsto...   246   2e-65
APE2540 [S] COG2606 Uncharacterized conserved protein Ape Aeropy...    66   4e-11
BS_ywhH [S] COG2606 Uncharacterized conserved protein Bsu Bacill...    63   3e-10
PA1357 [S] COG2606 Uncharacterized conserved protein Pae Pseudom...    59   6e-09
STM4549 [S] COG2606 Uncharacterized conserved protein Sty Salmon...    58   1e-08

>RSc0260 [S] COG2606 Uncharacterized conserved protein Rso Ralstonia
           solanacearum
          Length = 170

 Score =  246 bits (627), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 118/155 (76%), Positives = 134/155 (86%)

Query: 5   AALPSSAQRVADLLSAMGHDKPVVMLPSTGRTSAEAAAAVGCSVAEIAKSIIFRRLSDDA 64
           A LP SAQRVAD L A+G+DK +VMLP+TG+TSAEAAA +GCSVAEIAKSI+FRR  DDA
Sbjct: 12  APLPESAQRVADHLRALGYDKTIVMLPATGKTSAEAAAGLGCSVAEIAKSILFRRAEDDA 71

Query: 65  PVLVIASGANRVDEAKVTALTGALGKADAKFVRDATGYAIGGVCPVGHVIKPIMLIDRDL 124
           PVLVIASG NRVDEAKV+A  GAL KADA+FVR+ TGYAIGGVCPVGH +KP+ML+D DL
Sbjct: 72  PVLVIASGTNRVDEAKVSARVGALAKADARFVREKTGYAIGGVCPVGHAVKPVMLLDEDL 131

Query: 125 FNFDSVWAAAGHPHAVFNLSAAQLEKMTGGTVADV 159
           F FDSVWAAAGHPHAVFNL+ A+L  MTG  VAD+
Sbjct: 132 FRFDSVWAAAGHPHAVFNLTPAELAAMTGAPVADI 166


>APE2540 [S] COG2606 Uncharacterized conserved protein Ape Aeropyrum pernix
          Length = 152

 Score = 65.9 bits (159), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 78/150 (52%), Gaps = 4/150 (2%)

Query: 12  QRVADLLSAMGHDKPVVMLPSTGRTSAEAAAAVGCSVAEIAKSIIFRRLSDDAPVL-VIA 70
           ++V + + A G    ++++    RT AEAAA +G S +EI K++I   L +   V  V+ 
Sbjct: 3   EKVEEWIKARGLTWRLLIMQKPTRTVAEAAALLGVSESEIVKTLIV--LDNAGGVYAVVI 60

Query: 71  SGANRVDEAKVTALTGA-LGKADAKFVRDATGYAIGGVCPVGHVIKPIMLIDRDLFNFDS 129
            G  R++   +  L G  +  A A  V + TGY +GGV PV      ++++DR L +   
Sbjct: 61  PGDKRLNINSMKELAGKPVRLARANEVVELTGYPVGGVPPVALPPNIVLVVDRILLSRKK 120

Query: 130 VWAAAGHPHAVFNLSAAQLEKMTGGTVADV 159
           V+   G  +A+   S  +L + TG  VADV
Sbjct: 121 VYGGGGRENALLEFSPRELVEATGAVVADV 150


>BS_ywhH [S] COG2606 Uncharacterized conserved protein Bsu Bacillus subtilis
          Length = 157

 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 70/148 (47%), Gaps = 2/148 (1%)

Query: 10  SAQRVADLLSAMGHDKPVVMLPSTGRTSAEAAAAVGCSVAEIAKSIIFRRLSDDAPVLVI 69
           S + V    +    +  V    ++  T  +AA  +G S++ IAKS+ FR   D   +L++
Sbjct: 2   SLKSVRTHFTQWNRENDVTEFETSSATVEQAAETIGVSLSRIAKSLSFRGEGDQV-ILIV 60

Query: 70  ASGANRVDEAKVTALTGALGKA-DAKFVRDATGYAIGGVCPVGHVIKPIMLIDRDLFNFD 128
           A+G  ++D  K     G   +      V + TG+ IGGVCP G    P + +D  L  F 
Sbjct: 61  AAGDAKIDNKKSRQTFGFKARMLSPNEVLEQTGHEIGGVCPFGLAHDPEVYLDVSLKRFQ 120

Query: 129 SVWAAAGHPHAVFNLSAAQLEKMTGGTV 156
           +V+ A G  ++   L+  +L + +   V
Sbjct: 121 TVFPACGSRNSAIELTPKELSEFSFSKV 148


>PA1357 [S] COG2606 Uncharacterized conserved protein Pae Pseudomonas
           aeruginosa
          Length = 158

 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 76/161 (47%), Gaps = 7/161 (4%)

Query: 10  SAQRVADLLSAMGHDKPVVMLPSTGRTSAEAAAAVGCSVAEIAKSIIFRRLSDDAPVLVI 69
           S + V    +    D  ++ L ++  T A AA A G     IAK++  R    +  VLV+
Sbjct: 2   SLESVRRFFAEKAPDLRIIELETSTATVALAAEAHGVEPGRIAKTLSLR--VGERTVLVV 59

Query: 70  ASGANRVDEAKVTALTGALGKAD---AKFVRDATGYAIGGVCPVGHVIKPIMLIDRDLFN 126
           A G  R+D  K+ A  G  GKA    A+ V + TG+ +GGVCP G      +  D  L  
Sbjct: 60  ARGDARLDNRKIKAAFG--GKAKMLGAEDVVELTGHPVGGVCPFGLATPLAVYCDVSLQA 117

Query: 127 FDSVWAAAGHPHAVFNLSAAQLEKMTGGTVADVRLEAVPQA 167
           FD V  AAG  H+   ++  ++ ++      DV  E + +A
Sbjct: 118 FDEVLPAAGAVHSAVRIAPQRMAELVDAQWVDVCQEVLQEA 158


>STM4549 [S] COG2606 Uncharacterized conserved protein Sty Salmonella
           typhimurium LT2
          Length = 152

 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 71/151 (47%), Gaps = 3/151 (1%)

Query: 10  SAQRVADLLSAMGHDKPVVMLPSTGRTSAEAAAAVGCSVAEIAKSIIFRRLSDDAPVLVI 69
           S Q V   L+    D  ++ L  +  T   AA A      +IAK++  +    D  +LV+
Sbjct: 2   SLQSVRQFLADHAPDIEIIELNQSTATVELAAKAHNVEPGQIAKTLSLK--VKDTIILVV 59

Query: 70  ASGANRVDEAKVTALTGALGKA-DAKFVRDATGYAIGGVCPVGHVIKPIMLIDRDLFNFD 128
           A G  R+D  K+    GA  +   +  V +ATG+ +GGVCP G      +  D  L  ++
Sbjct: 60  AKGDARLDNKKLKTTFGAKARMLSSDEVVNATGHPVGGVCPFGLEHPLPVYCDISLKGYN 119

Query: 129 SVWAAAGHPHAVFNLSAAQLEKMTGGTVADV 159
            V  AAG  H+   ++  ++ ++T  T  DV
Sbjct: 120 EVLPAAGATHSAVRITPERMAELTSATWVDV 150