BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.4554.p (219 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc3264_1 [R] COG2823 Predicted periplasmic or secreted lipoprot... 130 3e-30 HI1658 [R] COG2823 Predicted periplasmic or secreted lipoprotein... 114 2e-25 PA4426 [R] COG2823 Predicted periplasmic or secreted lipoprotein... 112 8e-25 STM3267 [R] COG2823 Predicted periplasmic or secreted lipoprotei... 107 3e-23 yraP [R] COG2823 Predicted periplasmic or secreted lipoprotein E... 102 7e-22 >RSc3264_1 [R] COG2823 Predicted periplasmic or secreted lipoprotein Rso Ralstonia solanacearum Length = 199 Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 76/190 (40%), Positives = 110/190 (57%) Query: 10 RLRRPLAAVALGGMVALSLQGCFAVLAGGALATTFAATDRRTLGAQTEDKAIVVKGEARI 69 RL+R + AL G+ A L CF + AG ATDRR QT D+ + ++ E + Sbjct: 10 RLKRTVVLAALAGITATQLTACFPLFAGAVAGGVALATDRRPTATQTIDRGLQMEAENSL 69 Query: 70 PEVVAAGSHVNVTAFNRKVLLSGEVPDEASKAAAEREVKAIQNVETVYNELEVGPASSFG 129 + +HVNVT +NRKVLL+GE DE K + + ++N V NE+ +G SSFG Sbjct: 70 IARYSGLAHVNVTVYNRKVLLTGEARDEQVKQQISQYAQKLENAREVVNEMTIGEFSSFG 129 Query: 130 SRSTDALITSKVLASLVDDKALYASAFKVTTERGIVYMMGRVTPREGQRAAQIASGVSDV 189 +R+ D +T+KV A+L + L ++ KVTTE VY+MG VT EG+ A ++A V V Sbjct: 130 ARTNDTYLTTKVKAALAGTEGLPWNSIKVTTEAQAVYLMGVVTESEGEHATEVARTVGGV 189 Query: 190 NKVVTLFEYI 199 KVV +F+Y+ Sbjct: 190 GKVVKVFDYV 199 >HI1658 [R] COG2823 Predicted periplasmic or secreted lipoprotein Hin Haemophilus influenzae Length = 193 Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 68/188 (36%), Positives = 103/188 (54%), Gaps = 2/188 (1%) Query: 14 PLAAVALGGMVALSLQGCFAVLAGGALATTFAATDRRTLGAQTEDKAIVVKGEARIPE-- 71 PL +A+ + LQGC A + GG ATD RT G Q +D+ + K E + + Sbjct: 5 PLKKLAILLGATIFLQGCVAAVIGGGAVAAKVATDPRTTGTQIDDETLEFKVENAVEKDA 64 Query: 72 VVAAGSHVNVTAFNRKVLLSGEVPDEASKAAAEREVKAIQNVETVYNELEVGPASSFGSR 131 + A VN ++N +VLL G+VP+ K A K ++ V VYNEL V P SF Sbjct: 65 QIKAEGRVNAVSYNGRVLLIGQVPNSDVKDTATALAKGVEGVNEVYNELTVSPKISFAQI 124 Query: 132 STDALITSKVLASLVDDKALYASAFKVTTERGIVYMMGRVTPREGQRAAQIASGVSDVNK 191 S D+ +T++V + + D + A+ KV +E G V+++G VT + AA IAS +S V K Sbjct: 125 SKDSWLTTQVKSKMFVDGRVKATDVKVISENGEVFLLGNVTQSQANAAADIASKISGVKK 184 Query: 192 VVTLFEYI 199 V+ +F+Y+ Sbjct: 185 VIKVFKYL 192 >PA4426 [R] COG2823 Predicted periplasmic or secreted lipoprotein Pae Pseudomonas aeruginosa Length = 192 Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 61/154 (39%), Positives = 92/154 (59%), Gaps = 3/154 (1%) Query: 50 RTLGAQTEDKAIVVKGEARIPEVVAA---GSHVNVTAFNRKVLLSGEVPDEASKAAAERE 106 RT+G++ +D I K I + A SH+ V ++N VL++G+ P K+ AE+ Sbjct: 39 RTIGSKIDDSLIETKAAVNIAKADPALDKDSHIVVVSYNGIVLIAGQTPRADLKSKAEQA 98 Query: 107 VKAIQNVETVYNELEVGPASSFGSRSTDALITSKVLASLVDDKALYASAFKVTTERGIVY 166 + +Q V+ V+NEL+V SS +R+ DA IT+K+ ++ D + +S KV TE GIVY Sbjct: 99 ARTVQKVKNVHNELQVTSPSSLLARNNDAWITTKLKTQMLSDPNVPSSRIKVVTENGIVY 158 Query: 167 MMGRVTPREGQRAAQIASGVSDVNKVVTLFEYIT 200 MMG V +E +A ++A GV V K+V LFEYI Sbjct: 159 MMGLVNQQEAAQAVRVAQGVDGVQKIVKLFEYIN 192 >STM3267 [R] COG2823 Predicted periplasmic or secreted lipoprotein Sty Salmonella typhimurium LT2 Length = 191 Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 73/189 (38%), Positives = 105/189 (55%), Gaps = 7/189 (3%) Query: 14 PLAAVALGGMVALSLQGCFAVLAGGALATTF-AATDRRTLGAQTEDKAIVVKGEARIP-- 70 PLA + + AL LQGC A G A AATD R++G Q +D + ++ + + Sbjct: 6 PLAVL----ISALLLQGCVAAAVVGTAAVGTKAATDPRSVGTQVDDGTLELRVSSALSKD 61 Query: 71 EVVAAGSHVNVTAFNRKVLLSGEVPDEASKAAAEREVKAIQNVETVYNELEVGPASSFGS 130 E + + +NVTA+ KVLL G+ P+ A A++ ++ VYNE+ G G+ Sbjct: 62 EQIKKETRINVTAYQGKVLLVGQSPNSELSARAKQIAMGVEGTTEVYNEIRQGQPIGLGT 121 Query: 131 RSTDALITSKVLASLVDDKALYASAFKVTTERGIVYMMGRVTPREGQRAAQIASGVSDVN 190 S D IT+KV + L+ + +S KVTTE G V+++G VT REG+ AA IAS VS V Sbjct: 122 ASNDTWITTKVRSQLLTSDQVKSSNVKVTTENGEVFLLGLVTEREGKAAADIASRVSGVK 181 Query: 191 KVVTLFEYI 199 +V T F YI Sbjct: 182 RVTTAFTYI 190 >yraP [R] COG2823 Predicted periplasmic or secreted lipoprotein Eco Escherichia coli K12 Length = 191 Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 70/178 (39%), Positives = 97/178 (54%), Gaps = 3/178 (1%) Query: 25 ALSLQGCFAVLAGGALATTF-AATDRRTLGAQTEDKAIVVKGEARIP--EVVAAGSHVNV 81 AL LQGC A G A AATD R++G Q +D + V+ + + E + + +NV Sbjct: 13 ALLLQGCVAAAVVGTAAVGTKAATDPRSVGTQVDDGTLEVRVNSALSKDEQIKKEARINV 72 Query: 82 TAFNRKVLLSGEVPDEASKAAAEREVKAIQNVETVYNELEVGPASSFGSRSTDALITSKV 141 TA+ KVLL G+ P+ A A++ + VYNE+ G G S D IT+KV Sbjct: 73 TAYQGKVLLVGQSPNAELSARAKQIAMGVDGANEVYNEIRQGQPIGLGEASNDTWITTKV 132 Query: 142 LASLVDDKALYASAFKVTTERGIVYMMGRVTPREGQRAAQIASGVSDVNKVVTLFEYI 199 + L+ + +S KVTTE G V++MG VT RE + AA IAS VS V +V T F +I Sbjct: 133 RSQLLTSDLVKSSNVKVTTENGEVFLMGLVTEREAKAAADIASRVSGVKRVTTAFTFI 190