BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.4551.p (421 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA4423 [R] COG3107 Putative lipoprotein Pae Pseudomonas aeruginosa 75 4e-13 PM0646 [R] COG3107 Putative lipoprotein Pmu Pasteurella multocida 57 8e-08 XF0553 Non COG 45 3e-04 yraM [R] COG3107 Putative lipoprotein Eco Escherichia coli K12 45 3e-04 ZyraM [R] COG3107 Putative lipoprotein EcZ Escherichia coli O157... 45 4e-04 >PA4423 [R] COG3107 Putative lipoprotein Pae Pseudomonas aeruginosa Length = 604 Score = 74.7 bits (182), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 95/374 (25%), Positives = 171/374 (45%), Gaps = 63/374 (16%) Query: 82 RMVLLLPSRSGAFGAAADAVRMGLLTAYSRQKE------NIQLAIVETGDSAADMQRAYD 135 R+ LLLP + G A A++ G L A+ + ++ +I+L S D R Sbjct: 251 RIALLLPQQ-GQLANVARALQDGFLAAHFQAQQAGQNPPSIKLYDSTQVRSLDDFYR--Q 307 Query: 136 EAASKYDILIGPLSRSAVTAVAQSGRVNKPTVALAQPDMNGEADLPLPPQMLAVGLSIDE 195 A ++++GPL + V +A ++ T+AL D + E P Q+ GL+ ++ Sbjct: 308 AQADGVELVVGPLEKPLVKQLASREQLPITTLALNYSDNSQEG----PAQLFQFGLAAED 363 Query: 196 EARQVAN--W----------VEKEKAPGKIFAVSTGIAWQ---------KRAARSFQLRA 234 EAR VA+ W V + + ++ A + +WQ + + QL A Sbjct: 364 EARAVASRAWGDGMRRAVALVPRGEWGDRVLAAFSQ-SWQSAGGSLIAAEHVDQPVQL-A 421 Query: 235 RQLGLQVETLELSTPANALSAPGLAQLAKRVEQEKPA-LIFVALDAAQTAQLRSAVG--- 290 +Q+ ++ + A L +Q+A + + + +F+A Q Q++ + Sbjct: 422 QQIADLLQLRQSEGRAQRLQGALGSQIATQPSRRQDIDFVFLAATPQQARQIKPTLAFQY 481 Query: 291 -NELPLYGTSQINPYTLKRDNPNDKLPELDGVRLIDIPWQLQPDN----LAVARYPRPAI 345 +LP+Y TS + YT + D+ +L+G+R + PW L P + A++P+ Sbjct: 482 AGDLPVYATSHL--YTGTNNPTQDQ--DLNGIRFCETPWLLNPSDPTRQQVAAQWPQA-- 535 Query: 346 NDGERPNADLARLYALGIDAYRVAYGIAQRQS--SFDIDGVTGRLNVNMNSGGATFFQRQ 403 N + RLYA+G+DAYR+A + + ++ S IDG+TG L++N +RQ Sbjct: 536 ------NGSMGRLYAMGVDAYRLAPRLPELKAVPSLQIDGLTGTLSLNPTQR----IERQ 585 Query: 404 ETQAVYQDGWPVPL 417 A +++G PL Sbjct: 586 LQWAEFRNGQVQPL 599 >PM0646 [R] COG3107 Putative lipoprotein Pmu Pasteurella multocida Length = 571 Score = 57.0 bits (136), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 72/316 (22%), Positives = 140/316 (44%), Gaps = 54/316 (17%) Query: 125 DSAADMQRAYDEAASKYDIL------------IGPLSRSAVTAVAQSGRVNKPTVALAQP 172 D++A + +D AA+ D++ +GPL + V + + ++ + L Sbjct: 286 DNSATQVQVFDTAATPVDVIFDQVKQAGIRTVVGPLLKQNVDMLLNNAQLVQGLDVLT-- 343 Query: 173 DMNGEADLPLPPQMLAVGLSIDEEARQVAN--WVEKEKAPGKIFAVSTGIAWQKRAARSF 230 +N ++ Q+ GLS ++EA AN W + + P +F + +R A +F Sbjct: 344 -LNSTSNERAIGQLCYYGLSPEDEAESAANKMWKDGIRTPS-VFVPQNDLG--RRTASAF 399 Query: 231 QLRARQLGLQVETLELSTPANALSAPGLAQLAKRVEQEKPALIFVALDAAQTAQLRSAVG 290 +R +QL +T AN A + ++ + + +++ + Q A++++ + Sbjct: 400 NVRWQQLA--------ATDANIRFYNLPADITYTLDDQNTSGVYIVAMSDQLAEIKTTID 451 Query: 291 NE---LPLYGTSQINPYTLKRDNPNDKLPE----LDGVRLIDIPWQLQPDNLAVARYPRP 343 N LY +S R N + PE ++G++ DIP+ ++ +Y + Sbjct: 452 NSGRTTKLYASS--------RSNSANNAPEYRLLMEGLQFSDIPF---FKDVTSNQYKK- 499 Query: 344 AINDGERPNADLARLYALGIDAYRVAYGIAQ-RQS-SFDIDGVTGRLNVNMNSGGATFFQ 401 I + + L RLYA+G DA+ + + RQ ++IDG+TG+L ++G + Sbjct: 500 -IEKLTKGDFSLMRLYAMGADAWLLINHFNELRQVPGYNIDGLTGKL----SAGANCNIE 554 Query: 402 RQETQAVYQDGWPVPL 417 R T YQ G + L Sbjct: 555 RDMTWFQYQSGGIISL 570 >XF0553 Non COG Length = 576 Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 89/354 (25%), Positives = 155/354 (43%), Gaps = 44/354 (12%) Query: 80 PIRMVLLLPSRSGAFGAAADAVRMGLLTA-YSRQKENIQLAIVETGDS-AADMQRAYDEA 137 P ++ +LLP +G+ AA VR G L Y+ + L +T + A Sbjct: 248 PSKLAVLLPL-TGSLATAAAPVRDGFLAGYYAETRRRPDLDFFDTASTPAGAKAAYAKAV 306 Query: 138 ASKYDILIGPLSRSAVTAVAQSGRVNKPTVALAQPDMNGEADLPLPPQMLAVGLSIDEEA 197 A+ D ++GPL R V+A+ G+++ P +AL + N + LP + L+ +++ Sbjct: 307 AAGADFVVGPLGRDEVSALFAQGQLSIPLLALNRSTGN---RVSLPSGSASFSLAPEDDG 363 Query: 198 RQVANWVEKEKAPGKIFAVSTGIAWQKRAARSFQLRARQLGLQVETLELSTPANALSAPG 257 A+++ + + + + +R ++F R R G QV L+A G Sbjct: 364 VIAADYLLAQ-GQRNVIVIGSNDDVGRRGVQAFMDRFRARGGQV-----------LAALG 411 Query: 258 LA----QLAKRV-EQEKPALIFVALDA----AQTAQLRSAVGNELPLYGTSQINPYTLKR 308 +A L R+ + ++ +F+A+ QL S + P GTSQ+ T K Sbjct: 412 VADVPGDLGPRLRDADRADAVFLAVRGPTARVLAPQLASLGLSSKPQVGTSQLVLGTGKP 471 Query: 309 DNPNDKLPELDGVRLIDIPWQLQPDNLAVARYPRPAINDGERPNADLA--RLYALGIDAY 366 + D L LDG+ PW +Q V P A PN A RL+A G+DA+ Sbjct: 472 E--EDTL--LDGIVYPTEPWSVQ----GVKSIPSAADVAVRLPNMRGAALRLFAFGVDAW 523 Query: 367 RVAYGIAQ---RQSSFDIDGVTGRLNVNMNSGGATFFQRQETQAVYQDGWPVPL 417 R++ + + + + GVTG L ++ +SG R A +++G +P+ Sbjct: 524 RLSVYLERLSAGGAGGGLSGVTGTLRLD-DSGNVI---RMPIWATFRNGQSIPV 573 >yraM [R] COG3107 Putative lipoprotein Eco Escherichia coli K12 Length = 678 Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 34/104 (32%), Positives = 56/104 (53%), Gaps = 11/104 (10%) Query: 317 ELDGVRLIDIPWQLQPDNLAVARYPRPAINDGERPNADLARLYALGIDAYRVAYGIAQ-R 375 E++G++ +IP L NL + + A+N+ + LAR+YA+G+DA+ +A +Q R Sbjct: 584 EMEGLQYSEIP-MLAGGNLPLMQQALSAVNN----DYSLARMYAMGVDAWSLANHFSQMR 638 Query: 376 Q-SSFDIDGVTGRLNVNMNSGGATFFQRQETQAVYQDGWPVPLA 418 Q F+I+G TG L N + R + YQ G VP++ Sbjct: 639 QVQGFEINGNTGSLTANPD----CVINRNLSWLQYQQGQVVPVS 678 >ZyraM [R] COG3107 Putative lipoprotein EcZ Escherichia coli O157:H7 EDL933 Length = 678 Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 34/102 (33%), Positives = 55/102 (53%), Gaps = 11/102 (10%) Query: 317 ELDGVRLIDIPWQLQPDNLAVARYPRPAINDGERPNADLARLYALGIDAYRVAYGIAQ-R 375 E++G++ +IP L NL + + A+N+ + LAR+YA+G+DA+ +A +Q R Sbjct: 584 EMEGLQYSEIP-MLAGGNLPLMQQALSAVNN----DYSLARMYAMGVDAWSLANHFSQMR 638 Query: 376 Q-SSFDIDGVTGRLNVNMNSGGATFFQRQETQAVYQDGWPVP 416 Q F+I+G TG L N + R+ + YQ G VP Sbjct: 639 QVQGFEINGNTGSLTANPD----CVINRKLSWLQYQQGQVVP 676