BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.4535.p (234 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BMEII0065 [E] COG0410 ABC-type branched-chain amino acid transpo... 224 2e-58 TM1139 [E] COG0410 ABC-type branched-chain amino acid transport ... 216 2e-56 all2912 [E] COG0410 ABC-type branched-chain amino acid transport... 214 2e-55 BMEII0873 [E] COG0410 ABC-type branched-chain amino acid transpo... 212 4e-55 RSc1754 [E] COG0410 ABC-type branched-chain amino acid transport... 212 7e-55 >BMEII0065 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Bme Brucella melitensis Length = 238 Score = 224 bits (570), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 108/233 (46%), Positives = 157/233 (67%), Gaps = 4/233 (1%) Query: 2 ILQVQDVHGYYGKSHILQGVSLQVDAGEVVTLLGRNGAGKTTTLKSIVGVVPPAQGQVLF 61 IL V+++H +YGKSHILQGV+ + GE ++LLGRNG+G++TT+K+I+G+VPP G+VL Sbjct: 6 ILDVRELHAHYGKSHILQGVTFDLKKGEAISLLGRNGSGRSTTMKAIMGLVPPTSGEVLL 65 Query: 62 EGKVISGLPSYQIAARGVCLVPEHRGIFKLLTVEENLTMA----ARKESAWGLEEIYAIF 117 GK ++G S++I G+ VPE R F LTV+ENL M A + W +E+++ F Sbjct: 66 NGKNLAGERSFKICRAGIGFVPEERETFLNLTVDENLQMGIQRGAEGATRWTVEQMFDYF 125 Query: 118 PRLKERRKNGGGQLSGGEQQMLAIARALMTHPHVLMLDEPVEGLAPVIVDEIVAQIKQIK 177 PRLKERR G LSGGEQQML + R L+ +P V+++DEP EGLAP IV + IK I Sbjct: 126 PRLKERRNTRAGSLSGGEQQMLTMCRTLLGNPLVMLIDEPTEGLAPKIVAVVGEMIKDIN 185 Query: 178 STGMSIILVEQNLEVCTQLADRHYIVEQGRIVYSGSNAQFLADEGVKDRYLGV 230 G+S++LVEQ L + +++ R ++ GRIV+ G+ + ADE + + +L V Sbjct: 186 RQGVSVVLVEQKLTIALKVSSRVCVMGHGRIVFEGTPDELTADEKLMEEWLAV 238 >TM1139 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Tma Thermotoga maritima Length = 239 Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 115/235 (48%), Positives = 160/235 (68%), Gaps = 5/235 (2%) Query: 1 MILQVQDVHGYYGKSHILQGVSLQVDAGEVVTLLGRNGAGKTTTLKSIVGVVPPAQGQVL 60 ++L+VQ +H YYG H ++G+ L+V G++VTL+G NGAGKTTTL +I G+V +G+++ Sbjct: 4 IVLEVQSLHVYYGAIHAIKGIDLKVPRGQIVTLIGANGAGKTTTLSAIAGLVRAQKGKII 63 Query: 61 FEGKVISGLPSYQIAARGVCLVPEHRGIFKLLTVEENLTMAA--RKES---AWGLEEIYA 115 F G+ I+ P++ I G+ LVPE R IF LTV ENL M A RK+ LE I++ Sbjct: 64 FNGQDITNKPAHVINRMGIALVPEGRRIFPELTVYENLMMGAYNRKDKEGIKRDLEWIFS 123 Query: 116 IFPRLKERRKNGGGQLSGGEQQMLAIARALMTHPHVLMLDEPVEGLAPVIVDEIVAQIKQ 175 +FPRLKER K GG LSGGEQQMLAI RALM+ P +LM+DEP GLAP++V E+ I++ Sbjct: 124 LFPRLKERLKQLGGTLSGGEQQMLAIGRALMSRPKLLMMDEPSLGLAPILVSEVFEVIQK 183 Query: 176 IKSTGMSIILVEQNLEVCTQLADRHYIVEQGRIVYSGSNAQFLADEGVKDRYLGV 230 I G +I+LVEQN ++A Y++E G+IV G ++ L +E V+ YLGV Sbjct: 184 INQEGTTILLVEQNALGALKVAHYGYVLETGQIVLEGKASELLDNEMVRKAYLGV 238 >all2912 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Nos Nostoc sp. PCC 7120 Length = 247 Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 110/232 (47%), Positives = 158/232 (68%), Gaps = 4/232 (1%) Query: 2 ILQVQDVH-GYYGKSHILQGVSLQVDAGEVVTLLGRNGAGKTTTLKSIVGVVPPAQGQVL 60 +L+V++VH GY ILQGV+ +V++GE+VT++G NGAGK+T K+I G++ P G++ Sbjct: 11 LLEVENVHAGYIKDVDILQGVNFRVESGELVTVIGPNGAGKSTLAKTIFGLLTPHTGKIT 70 Query: 61 FEGKVISGLPSYQIAARGVCLVPEHRGIFKLLTVEENLTMAA--RKESAWGLEE-IYAIF 117 F+GK I+GL S QI G+C VP+ +F L+VEENL M A R +S L++ I+A+F Sbjct: 71 FKGKNIAGLKSNQIVRLGMCYVPQIANVFPSLSVEENLEMGAFIRNDSLQPLKDKIFAMF 130 Query: 118 PRLKERRKNGGGQLSGGEQQMLAIARALMTHPHVLMLDEPVEGLAPVIVDEIVAQIKQIK 177 PRL +RR+ G LSGGE+QMLA+ +ALM P +L+LDEP L+P++V ++ Q+KQI Sbjct: 131 PRLSDRRRQRAGTLSGGERQMLAMGKALMLEPSLLVLDEPSAALSPILVTQVFEQVKQIN 190 Query: 178 STGMSIILVEQNLEVCTQLADRHYIVEQGRIVYSGSNAQFLADEGVKDRYLG 229 G +IILVEQN ++ADR Y++E GR SG + L D V + YLG Sbjct: 191 QEGTAIILVEQNARKALEMADRGYVLESGRDAISGPGQELLTDPKVAELYLG 242 >BMEII0873 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Bme Brucella melitensis Length = 252 Score = 212 bits (540), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 102/234 (43%), Positives = 160/234 (68%), Gaps = 5/234 (2%) Query: 2 ILQVQDVHGYYGKSHILQGVSLQVDAGEVVTLLGRNGAGKTTTLKSIVGVVPPAQGQVLF 61 +L ++ V YG++ ILQ VSL+V GE+VT++G NGAGKTTTL++IVG + P G++ F Sbjct: 19 MLTLEHVDAGYGRTTILQDVSLEVKEGEIVTIVGANGAGKTTTLRTIVGQIQPRAGKITF 78 Query: 62 EGKVISGLPSYQIAARGVCLVPEHRGIFKLLTVEENLTM-----AARKESAWGLEEIYAI 116 G+ I+ LP++++ RG+ L+PE R +F +TV ENL M AAR +EE+ + Sbjct: 79 LGEDITHLPAHEVVDRGIILIPEGRQLFPDMTVRENLQMGTYRRAARAAQESRMEEVLEL 138 Query: 117 FPRLKERRKNGGGQLSGGEQQMLAIARALMTHPHVLMLDEPVEGLAPVIVDEIVAQIKQI 176 FPR++ER LSGGEQQM+AIAR +M +P +LM DEP GLAP++V ++ +++I Sbjct: 139 FPRVRERLDQTASSLSGGEQQMVAIARGMMANPRILMFDEPSLGLAPIVVSQVFDVVRKI 198 Query: 177 KSTGMSIILVEQNLEVCTQLADRHYIVEQGRIVYSGSNAQFLADEGVKDRYLGV 230 +TG ++++VEQN+ ++A+R Y++E GR+V + S+ L ++ V+ YLG+ Sbjct: 199 AATGTTVLIVEQNVFTTLKVANRGYVLENGRVVLADSSEALLNNDHVRRAYLGI 252 >RSc1754 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Rso Ralstonia solanacearum Length = 239 Score = 212 bits (539), Expect = 7e-55, Method: Compositional matrix adjust. Identities = 105/234 (44%), Positives = 154/234 (65%), Gaps = 6/234 (2%) Query: 2 ILQVQDVHGYYGKSHILQGVSLQVDAGEVVTLLGRNGAGKTTTLKSIVGVVPPAQGQVLF 61 +L+V+ +H YYGKSHIL GV L V GE+V LLGRNG G++T KSI+G+V +G +L Sbjct: 7 MLEVRGLHAYYGKSHILHGVDLHVGEGEIVALLGRNGVGRSTLAKSIMGMVR-CEGHILL 65 Query: 62 EGKVISGLPSYQIAARGVCLVPEHRGIFKLLTVEENLTMAARK-----ESAWGLEEIYAI 116 GK + GL ++++A RG+ VPE+R IF LTV +NL + ++ W +++Y + Sbjct: 66 RGKDVRGLRTFEVAHRGIGYVPENRDIFPTLTVRQNLLLGEKRNPRQPRPRWQFDDMYRL 125 Query: 117 FPRLKERRKNGGGQLSGGEQQMLAIARALMTHPHVLMLDEPVEGLAPVIVDEIVAQIKQI 176 FPRLKER G LSGGEQQML + R LM P +++DEP EGLAP+IV ++ +K + Sbjct: 126 FPRLKEREHTPAGVLSGGEQQMLTLCRTLMGDPDFVIIDEPTEGLAPLIVAQVGEYLKTL 185 Query: 177 KSTGMSIILVEQNLEVCTQLADRHYIVEQGRIVYSGSNAQFLADEGVKDRYLGV 230 K+ G+S++LVEQ L + ++ R Y++ G+IV+ G+ A AD V+ +L V Sbjct: 186 KARGISVLLVEQKLAIALDISQRVYVMGHGQIVFEGTPADLKADARVRQEWLEV 239