BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.4496.p         (110 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YPO2333 [P] COG2076 Membrane transporters of cations and cationi...   135   2e-32
BMEI1045 [P] COG2076 Membrane transporters of cations and cation...   130   7e-31
STM1653 [P] COG2076 Membrane transporters of cations and cationi...   123   9e-29
SMc01523 [P] COG2076 Membrane transporters of cations and cation...   116   1e-26
AGc4218 [P] COG2076 Membrane transporters of cations and cationi...   116   1e-26

>YPO2333 [P] COG2076 Membrane transporters of cations and cationic drugs Ype
           Yersinia pestis
          Length = 112

 Score =  135 bits (341), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 63/110 (57%), Positives = 93/110 (84%)

Query: 1   MSAYLTLSVAIVAEVIATTALKSSQGFTRLLPALIVVLGYGVSFYCLSLTLRTMPTSVAY 60
           MS+++ L +AI+AEV+ATT LK+S GF+RL+P+++VV+GYG++F+ LS  ++TMP  +AY
Sbjct: 3   MSSFVYLFMAIIAEVVATTMLKASDGFSRLVPSVVVVIGYGIAFWGLSQVVKTMPLGIAY 62

Query: 61  AIWSGVGIVLVTLAAWLIHQQRLDWPAVAGIALIVAGVMVINVFSSSAGH 110
           AIWSG+GIVLV++AA  ++QQ+LDW AV G+ALI++GVMVIN+ S +  H
Sbjct: 63  AIWSGLGIVLVSIAATFMYQQKLDWAAVVGMALIISGVMVINLLSKTPMH 112


>BMEI1045 [P] COG2076 Membrane transporters of cations and cationic drugs Bme
           Brucella melitensis
          Length = 110

 Score =  130 bits (327), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 61/110 (55%), Positives = 87/110 (79%)

Query: 1   MSAYLTLSVAIVAEVIATTALKSSQGFTRLLPALIVVLGYGVSFYCLSLTLRTMPTSVAY 60
           M  Y  L++AI +EVI T +LK+S+GF+RL P+++VV+ YG++FY LSLTL+T+P  VAY
Sbjct: 1   MPVYTFLAIAIFSEVIGTLSLKASEGFSRLGPSIVVVVAYGLAFYFLSLTLKTIPVGVAY 60

Query: 61  AIWSGVGIVLVTLAAWLIHQQRLDWPAVAGIALIVAGVMVINVFSSSAGH 110
           AIWSGVG+ LV L  WL+  Q+LD PA+ G+ LI+AGV+V+N+ S++A H
Sbjct: 61  AIWSGVGVTLVALIGWLVFGQKLDLPAIVGMGLIIAGVIVLNLLSNTAQH 110


>STM1653 [P] COG2076 Membrane transporters of cations and cationic drugs Sty
           Salmonella typhimurium LT2
          Length = 112

 Score =  123 bits (309), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 58/109 (53%), Positives = 81/109 (74%)

Query: 2   SAYLTLSVAIVAEVIATTALKSSQGFTRLLPALIVVLGYGVSFYCLSLTLRTMPTSVAYA 61
            A + L +AIV EVIAT +LK S  FTRL+P+L+ ++GY ++F+CL++ +RT+P  + YA
Sbjct: 4   EAVIFLFIAIVVEVIATISLKLSDSFTRLVPSLVTIIGYCIAFWCLTIPMRTIPAGIIYA 63

Query: 62  IWSGVGIVLVTLAAWLIHQQRLDWPAVAGIALIVAGVMVINVFSSSAGH 110
           IWSGVGIVL+ L  WL   Q+LD PA+ G+ LI+ GV+VIN+FS S  H
Sbjct: 64  IWSGVGIVLIGLIGWLFLGQKLDVPAIIGMLLIICGVIVINLFSKSVSH 112


>SMc01523 [P] COG2076 Membrane transporters of cations and cationic drugs Sme
           Sinorhizobium meliloti
          Length = 113

 Score =  116 bits (291), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 54/107 (50%), Positives = 83/107 (77%)

Query: 4   YLTLSVAIVAEVIATTALKSSQGFTRLLPALIVVLGYGVSFYCLSLTLRTMPTSVAYAIW 63
           Y  L +AIV EV+ T+A++++Q FTRL P +++VL Y V+F+ LS  LR +P  +AYA+W
Sbjct: 7   YTVLVIAIVFEVLGTSAMQAAQHFTRLTPTVLMVLCYAVAFFFLSYALRYIPVGIAYALW 66

Query: 64  SGVGIVLVTLAAWLIHQQRLDWPAVAGIALIVAGVMVINVFSSSAGH 110
           SG+GIVL+++A +++  Q+LD PA+ G+ALI+AGV+V+N+FS S  H
Sbjct: 67  SGLGIVLISIAGYVVFGQKLDLPAILGLALIIAGVLVLNLFSKSTFH 113


>AGc4218 [P] COG2076 Membrane transporters of cations and cationic drugs Atu
           Agrobacterium tumefaciens strain C58 (Cereon)
          Length = 114

 Score =  116 bits (290), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 57/107 (53%), Positives = 76/107 (71%)

Query: 4   YLTLSVAIVAEVIATTALKSSQGFTRLLPALIVVLGYGVSFYCLSLTLRTMPTSVAYAIW 63
           Y  L  AIV EVIAT+ L+ SQ FTRLLP +++ L YG +FY LS TLR +P  VAYAIW
Sbjct: 8   YGALVAAIVCEVIATSFLQQSQQFTRLLPTVLMALFYGAAFYLLSFTLRALPVGVAYAIW 67

Query: 64  SGVGIVLVTLAAWLIHQQRLDWPAVAGIALIVAGVMVINVFSSSAGH 110
           SG+GIVL++   + + +Q LD  AV G+  I+ GV+++NVFS + GH
Sbjct: 68  SGLGIVLISGIGYFVFRQTLDLAAVIGLGFIITGVVIVNVFSKTVGH 114