BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.4472.p         (134 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SMb21127 Non COG                                                       62   4e-10
mll9651 Non COG                                                        46   3e-05
SMa1456 Non COG                                                        45   4e-05
FN0230 Non COG                                                         32   0.37 
SA1609 [C] COG1866 Phosphoenolpyruvate carboxykinase (ATP) Sau S...    31   0.82 

>SMb21127 Non COG
          Length = 123

 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 51/91 (56%)

Query: 41  LSMDLQALAAAAHVHRNTISRAPAAESVQRYLRDAVRILRIGTEIAGSVEKSLFWFKNSP 100
           L + L  LA    V RNT++    A  V   L   VRIL + +E+AG   +++ WFK+ P
Sbjct: 30  LGVTLAELAKLIGVARNTLTAKSGARKVDSALSKVVRILAMASEMAGDEARAVIWFKHQP 89

Query: 101 LPVFDYMSAQTMVSEGRTDDLVRYLLSLDAG 131
           +P +   +A  +V EG+ D ++ YL S+ AG
Sbjct: 90  IPGWAGKTAFDLVGEGKADKVLAYLESVRAG 120


>mll9651 Non COG
          Length = 111

 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 2/87 (2%)

Query: 41  LSMDLQALAAAAHVHRNTISRAP--AAESVQRYLRDAVRILRIGTEIAGSVEKSLFWFKN 98
             M    LA  A + R T+ R+   AA   Q  LR+ + I+   ++ AG  E+++ W++ 
Sbjct: 16  FGMSKGQLAQTAGLARETLYRSERSAAAKTQGRLREMLEIISRVSDWAGGKEQAMAWYRA 75

Query: 99  SPLPVFDYMSAQTMVSEGRTDDLVRYL 125
            PLP F   +A+ +V +G+   +  YL
Sbjct: 76  QPLPAFGGRTAEALVKDGKAAAVRDYL 102


>SMa1456 Non COG
          Length = 129

 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 2/96 (2%)

Query: 32  LSPHRFCLLLSMDLQALAAAAHVHRNTISRAPAAE--SVQRYLRDAVRILRIGTEIAGSV 89
           ++  +  +   M    LA  A + R T+ R   +     Q  LR+ + I+   T+ AG  
Sbjct: 25  IAVQQVAVGFGMSKTQLAETAGLARETLYRPERSRGTKTQNRLREMLEIISRVTDWAGGK 84

Query: 90  EKSLFWFKNSPLPVFDYMSAQTMVSEGRTDDLVRYL 125
           E+++ W++  PLP F   +A+ +V +G+   +  YL
Sbjct: 85  EQAMAWYRAQPLPAFGGRTAEALVKDGKAAAVRDYL 120


>FN0230 Non COG
          Length = 232

 Score = 32.0 bits (71), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 5/48 (10%)

Query: 53  HVHRNTISRAPAAESVQRYLRDAVRILRIGTEIAGSVEKSLFWFKNSP 100
           + ++N  S     E   +YL+D V I  IG E+ G       W K SP
Sbjct: 103 NTYKNVESYRKRFEDSYKYLKDYVDIWEIGNEVNGEE-----WIKESP 145


>SA1609 [C] COG1866 Phosphoenolpyruvate carboxykinase (ATP) Sau
           Staphylococcus aureus N315
          Length = 530

 Score = 30.8 bits (68), Expect = 0.82,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 24/48 (50%)

Query: 78  ILRIGTEIAGSVEKSLFWFKNSPLPVFDYMSAQTMVSEGRTDDLVRYL 125
           IL  GTE AG ++K +F   N  LP+ D MS     + G   D+  + 
Sbjct: 188 ILIGGTEYAGEMKKGIFSVMNYLLPMQDIMSMHCSANVGEKGDVALFF 235