BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.4404.p         (177 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AGl212 [P] COG0783 DNA-binding ferritin-like protein (oxidative ...   231   7e-61
CC2873 [P] COG0783 DNA-binding ferritin-like protein (oxidative ...    96   4e-20
RSc2687 [P] COG0783 DNA-binding ferritin-like protein (oxidative...    82   7e-16
all4145 [P] COG0783 DNA-binding ferritin-like protein (oxidative...    78   1e-14
all0458 [P] COG0783 DNA-binding ferritin-like protein (oxidative...    75   7e-14

>AGl212 [P] COG0783 DNA-binding ferritin-like protein (oxidative damage
           protectant) Atu Agrobacterium tumefaciens strain C58
           (Cereon)
          Length = 212

 Score =  231 bits (589), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 105/162 (64%), Positives = 125/162 (77%)

Query: 13  QRRKAPLATPGVLSAQASKEIGGALTMLLADIFALYLKTKNFHWHMSGPHFRDYHLLLDD 72
           + RK PLATP  L+ +AS+EI  ALT LLAD+F LY+KTKNFHWH+SGPHFRDYH LLD+
Sbjct: 48  KNRKLPLATPTDLATEASREISAALTALLADVFTLYIKTKNFHWHVSGPHFRDYHTLLDE 107

Query: 73  QSQQIIVITDAVAERVRKIGGTTLRSTGHVGRLQRLADNDADFVTPSDMLAELREDNLRL 132
           Q  QI  +TD +AER RKIGGTT+RS  H+ R++RL DNDADFVTP DMLAELREDN +L
Sbjct: 108 QGAQIFAMTDDIAERARKIGGTTIRSISHIARVKRLLDNDADFVTPEDMLAELREDNKQL 167

Query: 133 VGFMLATHELCDEHGDVATASLLENWIDEAEQRAWFLFESGR 174
              +  TH L  +  D AT SL+ENWIDE E+R WFLFE+ R
Sbjct: 168 TAILRQTHNLTSDLNDHATTSLIENWIDETERRTWFLFETTR 209


>CC2873 [P] COG0783 DNA-binding ferritin-like protein (oxidative damage
           protectant) Ccr Caulobacter vibrioides
          Length = 178

 Score = 95.9 bits (237), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 53/145 (36%), Positives = 80/145 (55%), Gaps = 1/145 (0%)

Query: 25  LSAQASKEIGGALTMLLADIFALYLKTKNFHWHMSGPHFRDYHLLLDDQSQQIIVITDAV 84
           L+A+   +I  +L  +LAD +ALYLKT  +HW++ GP+F+  H+LL+ Q Q+     DA+
Sbjct: 28  LTAKQRTDIAASLNKVLADSYALYLKTHGYHWNVRGPNFQSLHVLLEGQYQEEWAALDAI 87

Query: 85  AERVRKIGGTTLRSTGHVGRLQRLADNDADFVTPSDMLAELREDNLRLVGFMLATHELCD 144
           AER+R +G    +     G L  L D D +      M+ EL+ DN  ++  +     + D
Sbjct: 88  AERIRALGELAPQGYAAFGNLSSLKDGDPE-QDWEGMIGELKADNETVIRTLRDAMPIAD 146

Query: 145 EHGDVATASLLENWIDEAEQRAWFL 169
           E GD ATA LL   +   E+ AW L
Sbjct: 147 EAGDEATADLLTQRLQAHEKHAWML 171


>RSc2687 [P] COG0783 DNA-binding ferritin-like protein (oxidative damage
           protectant) Rso Ralstonia solanacearum
          Length = 166

 Score = 82.0 bits (201), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 70/139 (50%), Gaps = 1/139 (0%)

Query: 31  KEIGGALTMLLADIFALYLKTKNFHWHMSGPHFRDYHLLLDDQSQQIIVITDAVAERVRK 90
           K+I   L+ LLAD ++LYLKT NFHW+++GP F   HL+ + Q  ++    D+VAER+R 
Sbjct: 24  KKIAEGLSRLLADTYSLYLKTHNFHWNVTGPMFNTLHLMFETQYNELWTAVDSVAERIRA 83

Query: 91  IGGTTLRSTGHVGRLQRLADNDADFVTPSDMLAELREDNLRLVGFMLATHELCDEHGDVA 150
           +G     S     RL  + +         DM+ EL   +  +     +     D+  D  
Sbjct: 84  LGYPAPGSYSEFARLSSIPEAKG-VPAAEDMIRELVAGHESVTRTARSLFPDVDKAADEP 142

Query: 151 TASLLENWIDEAEQRAWFL 169
           TA LL   +D  E+ AW L
Sbjct: 143 TADLLTQRMDIHEKTAWML 161


>all4145 [P] COG0783 DNA-binding ferritin-like protein (oxidative damage
           protectant) Nos Nostoc sp. PCC 7120
          Length = 163

 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 73/147 (49%), Gaps = 2/147 (1%)

Query: 23  GVLSAQASKEIGGALTMLLADIFALYLKTKNFHWHMSGPHFRDYHLLLDDQSQQIIVITD 82
           G+  A  +K I   L+ LLAD + LYLKT NFHW+++GP F+  HL+ + Q  ++ +  D
Sbjct: 13  GIDEANRAK-IAEGLSRLLADTYTLYLKTHNFHWNVTGPMFQTLHLMFETQYTELALAVD 71

Query: 83  AVAERVRKIGGTTLRSTGHVGRLQRLADNDADFVTPSDMLAELREDNLRLVGFMLATHEL 142
            VAER+R +G     +     +L  + +         +M+  L E    +V    +   +
Sbjct: 72  LVAERIRALGYPAPGTYSEYAKLSSIPETPG-VPKAKEMIRLLVEGQEAVVRTARSIFPV 130

Query: 143 CDEHGDVATASLLENWIDEAEQRAWFL 169
            DE  D  TA LL   +   E+ AW L
Sbjct: 131 VDEVNDEPTADLLTQRMQVHEKTAWML 157


>all0458 [P] COG0783 DNA-binding ferritin-like protein (oxidative damage
           protectant) Nos Nostoc sp. PCC 7120
          Length = 179

 Score = 75.1 bits (183), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 73/139 (52%), Gaps = 4/139 (2%)

Query: 35  GALTML---LADIFALYLKTKNFHWHMSGPHFRDYHLLLDDQSQQIIVITDAVAERVRKI 91
           G + +L   LAD + L +KTK +HW + GP FR  H L ++  +++    DA+AERVR +
Sbjct: 15  GVINLLNQDLADSYLLLVKTKKYHWDVVGPQFRSLHQLWEEHYEKLTENIDAIAERVRTL 74

Query: 92  GGTTLRSTGHVGRLQRLADNDADFVTPSDMLAELREDNLRLV-GFMLATHELCDEHGDVA 150
           GG  + S     +L  L ++  D  + + M+A L +D+ +L+           DE  D  
Sbjct: 75  GGYPIGSMEGFLQLATLKEHAGDVPSATGMVANLVQDHEQLIRNLRDHVDRSGDEFQDQG 134

Query: 151 TASLLENWIDEAEQRAWFL 169
           TA  L   ++E E+ AW L
Sbjct: 135 TADFLTGLMEEHEEIAWML 153