BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.4391.p (306 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SA2480 [G] COG3386 Gluconolactonase Sau Staphylococcus aureus N315 83 9e-16 CC2128 Non COG 82 2e-15 SMa0196 [G] COG3386 Gluconolactonase Sme Sinorhizobium meliloti 82 2e-15 AGl1647 [G] COG3386 Gluconolactonase Atu Agrobacterium tumefacie... 78 2e-14 RSp0824 [G] COG3386 Gluconolactonase Rso Ralstonia solanacearum 75 1e-13 >SA2480 [G] COG3386 Gluconolactonase Sau Staphylococcus aureus N315 Length = 324 Score = 82.8 bits (203), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 70/250 (28%), Positives = 119/250 (47%), Gaps = 19/250 (7%) Query: 21 HFRTPRKNAWGDANRGGLPIDSFLEGPSFDRQGRLYVTDIPYGRIFRISMDGQW--ELIT 78 +T W + ++ GL LEG +FDRQG+L++ D+ G IF+I+ + + Sbjct: 27 ELQTITAEPWLEISKKGLQ----LEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFV 82 Query: 79 EYDGWPNGLKIDKNGRIVIT---DYKR--GLVQLDADTGTVTPLLETVGSEGFKGVNDLV 133 + P +KI K+GR+ + D+K G+ + + ++E + + ++D+V Sbjct: 83 SHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTA--YCIDDMV 140 Query: 134 FGPKGEIYFTD-QGQTGLQDATGRVYRLDPNGQ-LTCLINTIPSPNGIVYDPALNHLLVA 191 F KG YFTD +G + + G VY + P+ + +T +I I NGI L V Sbjct: 141 FDSKGGFYFTDFRGYS--TNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVT 198 Query: 192 VTRAQQIWRIPLHHNGVVGKV--GVFANLHGGMAGPDGLALDAESCLYIAHTGFGSIWRL 249 T A ++ RI L +GV + G GPD +D++ LY+A G G + Sbjct: 199 ETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVF 258 Query: 250 SKFAEPLLRI 259 +K P+ +I Sbjct: 259 NKRGYPIGQI 268 >CC2128 Non COG Length = 303 Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 83/298 (27%), Positives = 125/298 (41%), Gaps = 46/298 (15%) Query: 42 SFLEGPSFDRQGRLYVTDIPYGRIFRISMDGQWELITEYDGWPNGLKIDKNGRIVITD-- 99 F EGP G + +T+I R+ R+ DG+ E + E G PNG I +G I +T+ Sbjct: 11 QFPEGPIAMADGSVILTEIQGQRLTRVWPDGRKETVAETGGGPNGAAIGPDGAIYVTNNG 70 Query: 100 --------------------YKRGLVQ-LDADTGTVTPLLETVGSEGFKGVNDLVFGPKG 138 + G +Q +D TG +T L + G NDLVF +G Sbjct: 71 GSFQFFEANGLNIPGPTPPTHTGGAIQRVDLKTGAITTLYTECDGKPLVGPNDLVFDKQG 130 Query: 139 EIYFTDQG-QTGLQDATGRVYRLDPNG-QLTCLINTIPSPNGIVYDPALNHLLVAVTRAQ 196 +FTD G T G +Y P+G ++T + SPNG+ P + +A T Sbjct: 131 GFWFTDHGCSTPDGRKYGALYYALPDGSKITRWRDHFVSPNGVGLSPDEKTVYMADTMLG 190 Query: 197 QIWRIPLHHNGVVGKV------GVFANLHGGMAGPDGLALDAESCLYIAH------TGFG 244 ++W + GV+ V NL G D LA++A+ + +A T F Sbjct: 191 RLWSFDVASPGVLADAVPLLPGNVVCNLPGYQL-LDSLAVEADGKVCVATIINGGITAFA 249 Query: 245 SIWRLSKFAEPLLRIRSTAGISTTNLAFGGPDGKSLFITESQTGSILRAEVPVAGLPM 302 +A P + TN+ FGG D + +IT S TG + +A P GL + Sbjct: 250 PDGSTEHYAFP--------DVIVTNICFGGADMRDAWITASGTGKLYKARWPRPGLKL 299 >SMa0196 [G] COG3386 Gluconolactonase Sme Sinorhizobium meliloti Length = 304 Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 78/276 (28%), Positives = 120/276 (43%), Gaps = 27/276 (9%) Query: 43 FLEGPS-FDRQGRLYVTDIPYGRIFRISMDGQWELITEYDGWPNGLKIDKNGRIVITDYK 101 + EGP F+ +L +DIP RI R + +G + + + NG D+ GR++ ++ Sbjct: 33 WAEGPVWFNDANQLLWSDIPNQRILRWTPEGGVSVYRQPSNFTNGHTRDRRGRLISCEHG 92 Query: 102 RGLVQLDADTGTVTPLLETVGSEGFKGVNDLVFGPKGEIYFTDQGQTGLQDATG------ 155 V G++T L + ND+V G I+FTD + D G Sbjct: 93 TRRVTRTEVDGSITVLADRFEGRRLNSPNDVVVKSDGTIWFTDPTYGIMSDYEGYHADPE 152 Query: 156 ----RVYRLDPN-GQLTCLINTIPSPNGIVYDPALNHLLVAVTRAQQIWRIPLH------ 204 VYRLDP G+L+ ++ PNG+ + P L VA + A R+P H Sbjct: 153 QPTRNVYRLDPETGELSAVVTDFTQPNGLAFSPDEKILYVADSSASHDDRLPRHIRAFDL 212 Query: 205 -HNGVVGKVGVFANLHGGMAGPDGLALDAESCLYIAHTGFGSIWRLSKFAEPLLRIRSTA 263 G + VF + G+ PDG+ DA L+ + G G + + + +IR Sbjct: 213 TDGGRLANGRVFCVIDKGI--PDGIRTDANGNLW-SSAGDG-VHCFDTAGKLIGKIRVPQ 268 Query: 264 GISTTNLAFGGPDGKSLFITESQTGSILRAEVPVAG 299 ++ NL FGGP LFI + T S+ V V G Sbjct: 269 TVA--NLTFGGPRRNRLFI--AATRSLYSVYVAVTG 300 >AGl1647 [G] COG3386 Gluconolactonase Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 348 Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 81/267 (30%), Positives = 118/267 (44%), Gaps = 31/267 (11%) Query: 43 FLEGPS-FDRQGRLYVTDIPYGRIFRISMDGQWELITEYDGWPNGLKIDKNGRIVITDY- 100 + EGP F L +DIP R+ R DG + + + NG D+ GR+V ++ Sbjct: 77 WAEGPVWFADLNCLLFSDIPNERMLRWVPDGGISVFRQPSNFTNGNTRDRQGRLVSCEHG 136 Query: 101 KRGLVQLDADTGTVTPLLETVGSEGFKGVNDLVFGPKGEIYFTDQGQTGLQDATG----- 155 R + + + D G++T L ++ G + ND+V G ++FTD L D G Sbjct: 137 GRRVTRTEVD-GSITVLADSYGGKRLNSPNDVVVKSDGSVWFTDPTYGILSDYEGYKAEP 195 Query: 156 -----RVYRLDP-NGQLTCLINTIPSPNGIVYDPALNHLLVAVTRAQQIWRIPLHHN--G 207 VYRLDP G++ I+ PNG+ + P L VA + P H Sbjct: 196 EQKTRNVYRLDPATGKIDIAIDDFVQPNGLAFSPDETKLYVADSSYSHDISRPRHIRVFD 255 Query: 208 VVGKVGV-----FANLHGGMAGPDGLALDAESCLYIAHTGFGSIWRLSKFAEPLLRIRST 262 VV V + F NL G+ PDG LD L+ + G G + FA P R+ Sbjct: 256 VVDGVRLANGREFCNLDNGL--PDGFRLDTAGNLWTS-AGDG----VHCFA-PDGRLIGK 307 Query: 263 AGISTT--NLAFGGPDGKSLFITESQT 287 + T NL FGGP LFIT +++ Sbjct: 308 IKVPQTVANLTFGGPKKNRLFITATKS 334 >RSp0824 [G] COG3386 Gluconolactonase Rso Ralstonia solanacearum Length = 353 Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 74/283 (26%), Positives = 118/283 (41%), Gaps = 37/283 (13%) Query: 43 FLEGPSFDRQGR-LYVTDIPYGRIFRI-SMDGQWELITEYDGWPNGLKIDKNGRIVITDY 100 + EGP + GR L V+DIP RI + G + + + NG D+ GR+V ++ Sbjct: 74 WAEGPVYFPAGRYLLVSDIPNNRIMKYDETSGAFSVFRAPSNYANGNTRDRQGRLVTCEH 133 Query: 101 K--RGLVQLDADTGTVTPLLETVGSEGFKGVNDLVFGPKGEIYFTD---------QGQTG 149 R + + + D G +T L + + ND+V ++FTD +G Sbjct: 134 SVTRRVTRTEHD-GRITVLADRYQGKRLNAPNDVVVKSDDSVWFTDPLFGINGNWEGDKA 192 Query: 150 L-QDATGRVYRLDPNGQLTCLINTIPSPNGIVYDPALNHLLVAV---TRAQQIWRIPLHH 205 + AT VYR+DP G++ +I + +PNG+ + P L V T + IWR + Sbjct: 193 PPEQATTNVYRIDPGGEVRAVITDLVNPNGLAFSPDEKALYVVEWKGTPYRSIWRYDIAA 252 Query: 206 NGVVGKVGVFANLHGGMAGPDGLALDAESCLYIAHTGFGSIWR-------------LSKF 252 +G + GG DG +D + L+ G+GS R + Sbjct: 253 DGSASNKTRLIDA-GGPGALDGFRVDKDGNLWC---GWGSNGRPGVNPADYDGVKVFNAH 308 Query: 253 AEPLLRIRSTAGISTTNLAFGGPDGKSLFITESQTGSILRAEV 295 +P+ I NL FGGP G L++ S + L E Sbjct: 309 GKPIGFIHLPE--RCPNLTFGGPKGNRLYMASSHSLYALYVEA 349