BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.4349.p (358 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value CC1833 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transp... 372 e-103 sll1080 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate trans... 103 9e-22 AGc256 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transp... 88 3e-17 mlr7112 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate trans... 71 4e-12 mll1256 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate trans... 64 6e-10 >CC1833 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Ccr Caulobacter vibrioides Length = 369 Score = 372 bits (956), Expect = e-103, Method: Compositional matrix adjust. Identities = 182/328 (55%), Positives = 227/328 (69%), Gaps = 1/328 (0%) Query: 31 TDFKVCTSIYAGWMPWGEAQAQGILAKWGKKYGITISAVQLNDYVESINQYTAGKFDGCT 90 T++++ +IYAGWMPW AQ GI+ KW KY + I VQ+NDYVES+NQ++AGK DG T Sbjct: 43 TEYRIGWTIYAGWMPWAYAQQAGIVKKWADKYDVKIELVQINDYVESLNQFSAGKLDGVT 102 Query: 91 MTNMDALTIPAAGGVDSTALIVGDYSNGNDGIVLKGKNKKLADIKGQSVQLVEFSVSHYL 150 TNMDALT+PAA G D+T L++GDYSNGNDG+VLK LAD+KG+ V LVE SVSHYL Sbjct: 103 ATNMDALTVPAAAGKDTTVLMIGDYSNGNDGLVLK-DGATLADVKGRPVNLVELSVSHYL 161 Query: 151 LARALESVGLRERDVKVVNTSDADITAAFATPAVTSTVTWNPMLSSIAAAPDVSLVYTSK 210 LARALE GL+ DVK VNTSDADI AAF + VTWNP LS + AP V+ S Sbjct: 162 LARALEKAGLKMSDVKTVNTSDADIVAAFGATETKALVTWNPQLSEVKKAPGAKEVFNSA 221 Query: 211 QLPGEIMDLMVVNTKTLQDNPAFGKALTGAWYEMMSIMTAKDERATRALSAMGKASGTDL 270 +PGEI+D ++V+T+ L+ NP GKALTG WYE +++ A+ A M K SG+DL Sbjct: 222 MIPGEILDGLMVSTEALKANPNLGKALTGIWYETLALTVAQTPEGKAAREQMAKLSGSDL 281 Query: 271 AGFQSQLAATAMFYQPKAALEFATKKDLPTIMGRIAKFSFDHGILGPNVKSADGIGIAFD 330 AGF++QL T ++ PKAAL DL T R+ KFSF G+ G KS D IGI+F Sbjct: 282 AGFEAQLKTTYLYADPKAALAATVSPDLITANDRVRKFSFSMGLFGQGAKSVDDIGISFP 341 Query: 331 GNVSVGDKKNVKLRFDPSYMKMAADGKL 358 G +GD NVKLRFDP+Y++MAADGKL Sbjct: 342 GGKVLGDPNNVKLRFDPAYVQMAADGKL 369 >sll1080 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Syn Synechocystis Length = 352 Score = 103 bits (256), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 71/238 (29%), Positives = 116/238 (48%), Gaps = 6/238 (2%) Query: 38 SIYAGWMPWGEAQAQGILAKWGKKYGITISAVQLNDYVESINQYTAGKFDGCTMTNMDAL 97 S +AGW PW A+ +G+ AK G+ + + Y+ES+ AG+ DG + T D + Sbjct: 57 SNWAGWWPWAIAEEEGLFAK----NGVNVEMKWFDGYLESMQALAAGQLDGNSQTLNDTI 112 Query: 98 TIPAAGGVDSTALIVGDYSNGNDGIVLKGKNKKLADIKGQSVQLVEFSVSHYLLARALES 157 + A++V D S GND I++ + D+KG++V + E V +LL+ ALE Sbjct: 113 SFAGEAVNGEVAVLVNDNSAGNDKIIVTADINTVQDLKGKTVAIEEGVVDDFLLSLALER 172 Query: 158 VGLRERDVKVVNTSDADITAAFATPAVTSTVTWNPM-LSSIAAAPDVSLVYTSKQLPGEI 216 G+ DV + AAFA V + + P L+++ LV TS + PG I Sbjct: 173 EGMSRDDVVIKPLETGAAAAAFAAGQVDAVGAFPPFWLTALKREGSKELV-TSAEFPGAI 231 Query: 217 MDLMVVNTKTLQDNPAFGKALTGAWYEMMSIMTAKDERATRALSAMGKASGTDLAGFQ 274 DL+VV K +Q+ P +AL W+++ M E++ ++ S +L F+ Sbjct: 232 PDLLVVTEKLIQEKPEQVQALVNTWFDIRKFMEENPEKSDEIMAKRAGVSQEELQLFK 289 >AGc256 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 333 Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 86/306 (28%), Positives = 139/306 (45%), Gaps = 20/306 (6%) Query: 15 LAAFAGALSSAHAAPRTDFKVCTSIYAGWMPWGEAQAQGILAKWGKKYGITISAVQLNDY 74 +AA A +SSA A T + S + G+ P A+ GI K G K V + Sbjct: 27 IAAIATLVSSASAYAETAVTIGMSGWTGFAPLTLAKQAGIFEKNGLK-------VDIKKI 79 Query: 75 VESINQYTAGKFD-GCTMTNMDALTIPAAGGVDSTALIVGDYSNGNDGIVLKGKNKKLAD 133 ++ D C T ++ A GV ST + D S+G DGI ++ K+AD Sbjct: 80 PQASRHLALASGDIQCAATTVETWIAWNANGVKSTQIFQMDKSHGADGIAVRSDVSKVAD 139 Query: 134 IKGQSVQLVEFSVS-HYLLARALESVGLRERDVKVVNTSDADITAAFATPAVTSTVTWNP 192 +KG++V S ++ LA L+ GL +DVKVVN AF + +T+ P Sbjct: 140 LKGKTVAASAPGTSPYFFLAWILKENGLTLKDVKVVNLEPGPAAQAFVAGQNDAAMTYEP 199 Query: 193 MLSSIAAAPDV-SLVYTSKQLPGEIMDLMVVNTKTLQDNPAFGKALTGAWYEMMSIMTAK 251 LS++ AAPD ++ T+ P +MD L+ NP KAL ++++ + ++ A Sbjct: 200 YLSTVRAAPDKGKILATTLDYPA-VMDTFGCTPDFLKANPQAAKALADSYFQALELIKAD 258 Query: 252 DERATRALSAMGKASGTDLAGFQSQLAATAMF--YQPKAALEFATKKDLPTIMGRIAKFS 309 E++ + A K +G AA+A F +Q KAA + + + T + A Sbjct: 259 PEKSYATMGADVKQAG-------EAFAASAKFLEWQDKAANQKFFEGEFKTFSEKSADLL 311 Query: 310 FDHGIL 315 + G++ Sbjct: 312 LEIGVI 317 >mlr7112 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Mlo Mesorhizobium loti Length = 335 Score = 71.2 bits (173), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 69/242 (28%), Positives = 113/242 (46%), Gaps = 14/242 (5%) Query: 33 FKVCTSIYAGWMPWGEAQAQGILAKWGKKYGITISAVQLNDYVES--INQYTA-GKFDGC 89 FK+ + G+ W A A+G+ G +S VQ+ ++ E IN A G+ D Sbjct: 41 FKIGIEPWLGYGQWHVADAKGLFKANG------LSDVQIVNFAEDKDINAALASGQLDAA 94 Query: 90 TMTNMDALTIPAAGGVDSTALIVGDYSNGNDGIVLKGKNKKLADIKGQSVQLVEFSVSHY 149 + A+ + AAG L++ D S D I+ +AD+KG+ V E + S Sbjct: 95 NIATHTAMGMVAAGLPVKIVLLL-DVSMTADAIIAGKDVTSIADLKGKQVAFEEGTTSDI 153 Query: 150 LLARALESVGLRERDVKVVNTSDADITAAFATPAVTSTVTWNPMLS-SIAAAPDVSLVYT 208 LL AL G+ DV+ V +D A V VT+ P L+ ++A DV L+++ Sbjct: 154 LLKYALARNGMSIADVQPVPMPASDAGGALIAGRVPVAVTYEPYLTVAMAQNKDVKLLFS 213 Query: 209 SKQLPGEIMDLMVVNTKTLQDNPAFGKALTGAWYEMMSIMTAKDERATRALSAMGKASGT 268 + + PG I D++VV + ++ P A+ +W + A D RA+ + KA G+ Sbjct: 214 AGEDPGLISDVLVVRDEVIKSRPGQVLAMIKSWDAALKDYNA-DTPGGRAI--IAKAVGS 270 Query: 269 DL 270 D+ Sbjct: 271 DV 272 >mll1256 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Mlo Mesorhizobium loti Length = 316 Score = 63.9 bits (154), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 65/262 (24%), Positives = 114/262 (43%), Gaps = 12/262 (4%) Query: 15 LAAFAGALS-----SAHAAPRTDFKVCTSIYAGWMPWGEAQAQGILAKWGKKYGITISAV 69 +A FA L+ SA T + S + G+ P A+ G+ K G +T+ V Sbjct: 4 IAVFAATLTFAAGLSAPVMAATSVTIGISGWTGFAPLTLAKQAGLFEKHG--LDVTLKKV 61 Query: 70 QLNDYVESINQYTAGKFDGCTMTNMDALTIPAAGGVDSTALIVGDYSNGNDGIVLKGKNK 129 +I +G C T ++ + A GV + + D S G DGIV++ K Sbjct: 62 PQASRPLAI---ASGDLQ-CAATTVETWLVWNASGVTTKQIFQLDKSYGADGIVVRNDIK 117 Query: 130 KLADIKGQSVQLVEFSVS-HYLLARALESVGLRERDVKVVNTSDADITAAFATPAVTSTV 188 +AD+KG++V S ++LLA L G+ +DV VVN AF + V Sbjct: 118 TVADLKGKNVASSAPGTSPYFLLAWVLNKNGMSTKDVTVVNLEPDAAAQAFLAGQNDAAV 177 Query: 189 TWNPMLSSIAAAPDVSLVYTSKQLPGEIMDLMVVNTKTLQDNPAFGKALTGAWYEMMSIM 248 T+ P +S++ D + + ++D + + L+ NP KAL +++E + ++ Sbjct: 178 TYEPFISAVRDKADQGHILATTLDYPMVLDTVGCTPEFLKANPDAAKALADSYFEALDLI 237 Query: 249 TAKDERATRALSAMGKASGTDL 270 +++ + A K S + Sbjct: 238 KKDPQKSYEIMGADVKQSAKEF 259