BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.4345.p (211 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value CC1828 Non COG 216 2e-56 CC1827 Non COG 113 3e-25 DR0613 [S] COG3665 Uncharacterized conserved protein Dra Deinoco... 79 1e-14 SMc04148_1 [S] COG3665 Uncharacterized conserved protein Sme Sin... 72 1e-12 AGc2528 [S] COG3665 Uncharacterized conserved protein Atu Agroba... 63 6e-10 >CC1828 Non COG Length = 208 Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 104/198 (52%), Positives = 138/198 (69%), Gaps = 1/198 (0%) Query: 12 DAVLRHVIPAGEPYLFNLKAGQTVRLLDLEGNQAIDTLFYSAANPRERYDPQRTLRRQNR 71 D V V+PA P+L +KAGQT+R++DLEGNQA+D L YSAA+ ERY Q T+ Q Sbjct: 10 DIVHDEVVPARAPWLHAVKAGQTLRIVDLEGNQAVDFLVYSAADDAERYSAQDTIAAQKN 69 Query: 72 AYLGAGSVLYSNLGRALATIVADTCGRHDTLGGACAQESNTVRYALEKRYMHSCRDNFLC 131 +L GSVL SN G A+ T+ A HDT+GGAC+ ESNT+RY + H+C +NFL Sbjct: 70 IFLREGSVLLSNEGAAMMTVTATAVAYHDTIGGACSCESNTLRYGHHTKAQHACVENFLV 129 Query: 132 ACLHDGRLTKRDIGANINFFMNVPVTPEGGLTFEDGISAPGKYVELHAEQDLIVLISNCP 191 A GR KRD+ +N+N+FMNVPV +G L DGISAPG +V+L AE D++V++SNCP Sbjct: 130 ANARQGR-GKRDMVSNVNWFMNVPVEADGALGIVDGISAPGLFVDLRAEMDVVVVVSNCP 188 Query: 192 QLNNPCNGWNPTAAEVLV 209 Q+NNPCNG+NPT +++ Sbjct: 189 QINNPCNGFNPTPVRMII 206 >CC1827 Non COG Length = 279 Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 74/211 (35%), Positives = 103/211 (48%), Gaps = 7/211 (3%) Query: 4 IESQRAPADAVLRHVIPAGEPYLFNLKAGQTVRLLDLEGNQAIDTLFYSAANPRERYDPQ 63 + S A AD V I G L G +RL DL G+ A+ L ++A P ER + Sbjct: 41 LPSGVAAADVVWDETIAPGGYASRRLSRGARLRLTDLRGDAAVSLLVFNAEQPVERLNIA 100 Query: 64 RTLRRQNRAYLGAGSVLYSNLGRALATIVADTCGRHDTLGGACAQESNTVRYALEKRYMH 123 TL+ Q YLG G +L S++GR LA++V DT G HD GA Q SNT +Y + H Sbjct: 101 DTLKVQWNGYLGQGRLLLSDMGRVLASLVEDTAGAHDAFCGASNQASNTRKYG--DGFNH 158 Query: 124 ----SCRDNFLCACLHDGRLTKRDIGANINFFMNVPVTPEGGLTFEDGISAPGKYVELHA 179 + RD F G L ++DI +N F V + G + G PG++V L A Sbjct: 159 GDHPNARDRFSLGVAKFG-LGRKDIHPCLNLFKEVRIGQGGETVVDVGPYPPGRFVTLRA 217 Query: 180 EQDLIVLISNCPQLNNPCNGWNPTAAEVLVW 210 E LIV+++NCP + +P + T W Sbjct: 218 EMALIVVLANCPHVLDPRPDYAVTPVRATAW 248 >DR0613 [S] COG3665 Uncharacterized conserved protein Dra Deinococcus radiodurans Length = 216 Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 56/170 (32%), Positives = 77/170 (45%), Gaps = 7/170 (4%) Query: 27 FNLKAGQTVRLLDLEGNQAIDTLFYSA-----ANPRERYDPQRTLRRQNRAYLGAGSVLY 81 F L G + ++D G Q D + ++A E RT YL G LY Sbjct: 23 FRLSKGDVLVVIDPLGEQVSDLMAFAADTVGSEGQAEWLSSGRTFDYNETIYLTTGHQLY 82 Query: 82 SNLGRALATIVADTCGRHDTLGGACAQESNTVRYALEKRYMH-SCRDNFLCACLHDGRLT 140 SN R + T++ D GRHD L C+ E+ + Y H SC N + A G + Sbjct: 83 SNRSRVMFTLLRDDVGRHDFLLTPCSTETFEILYPPGTAEGHPSCFGNLVKAFAPFG-IE 141 Query: 141 KRDIGANINFFMNVPVTPEGGLTFEDGISAPGKYVELHAEQDLIVLISNC 190 I +N FMNV V +G + IS PG+ +EL AE DLIV ++ C Sbjct: 142 PDQIPTTLNIFMNVLVDEKGKVNIGPPISQPGQRLELRAEMDLIVGLTAC 191 >SMc04148_1 [S] COG3665 Uncharacterized conserved protein Sme Sinorhizobium meliloti Length = 408 Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 59/208 (28%), Positives = 90/208 (43%), Gaps = 14/208 (6%) Query: 11 ADAVLRHVIPAGEPYLFNLKAGQTVRLLDLEGNQAIDTLFYSAANPRERYD------PQR 64 AD + I A + ++AG+ ++++D+ G Q D ++A + D R Sbjct: 186 ADPIEDIRIKAATASAYFVRAGEFIQIIDVYGRQCTDFQAFAARKVDKGLDLALDSTVTR 245 Query: 65 TLRRQNRAYLGAGSVLYSNLGRALATIVADTCGRHDTLGGACAQESNTVRYALEKRYMH- 123 TL ++ G S + L IV DT GRHD AC RY + Y Sbjct: 246 TLLGRSYPAPGLPSKAFDRDFEPLVEIVQDTVGRHDAFATAC-----NSRYYDDMGYPGH 300 Query: 124 -SCRDNFLCACLHDGRLTKRDIGANINFFMNVPVTPEGGLTFEDGISAPGKYVELHAEQD 182 +C DNF A G + R +N+F N + L ++ S PG YV + A D Sbjct: 301 VNCTDNFNAALAPYG-IPGRKGWEALNYFYNTDIDHNNQLYLDEPWSRPGDYVLMRALTD 359 Query: 183 LIVLISNCPQLNNPCNGWNPTAAEVLVW 210 L+ + S+CP + NGW+PT V + Sbjct: 360 LVCVSSSCPDDIDAANGWDPTDIHVRTF 387 >AGc2528 [S] COG3665 Uncharacterized conserved protein Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 318 Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 56/191 (29%), Positives = 83/191 (43%), Gaps = 20/191 (10%) Query: 18 VIPAGEPYLFNLKAGQTVRLLDLEGNQAIDTLFYSAANPRERYDPQRTLRRQNRAYLGAG 77 +IP F + G R++ +EG Q D ++A + ER+ +T R + ++ G Sbjct: 86 IIPPRGGRTFTVPKGHFFRIVSIEGPQVGDLNLWNAHDLNERFFSGKT-RALHATHVSVG 144 Query: 78 SVLYSNLG--RALATIVADTC----------GRHDTLGGACAQESNTVRYALEKRYMHSC 125 + L+SNL R +ATI DT G HD +G C +N + + Y H C Sbjct: 145 NRLWSNLPSLRPMATITHDTLSWYGFDEDGGGVHDVIGTRCDPYTNKLLSGGD--YHHCC 202 Query: 126 RDNFLCACLHDGRLTKRDIGANI----NFFMNVPVTPEGGLTFEDGISA-PGKYVELHAE 180 N A L+ R+ ++ N FM T + F PG Y+EL AE Sbjct: 203 HSNLTNALASARGLSFREAEPHVHDVLNVFMCTGFTRDTHQYFMKASPVRPGDYLELFAE 262 Query: 181 QDLIVLISNCP 191 DLI +S CP Sbjct: 263 IDLIGALSACP 273