BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.4321.p         (95 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SMa0249 [G] COG3090 TRAP-type C4-dicarboxylate transport system,...    32   0.41 
ZyjaG [S] COG3068 Uncharacterized protein conserved in bacteria ...    32   0.43 
ECs4922 [S] COG3068 Uncharacterized protein conserved in bacteri...    32   0.43 
yjaG [S] COG3068 Uncharacterized protein conserved in bacteria E...    32   0.45 
YDR280w [J] COG2123 RNase PH-related exoribonuclease Sce Sacchar...    31   0.64 

>SMa0249 [G] COG3090 TRAP-type C4-dicarboxylate transport system, small
          permease component Sme Sinorhizobium meliloti
          Length = 177

 Score = 31.6 bits (70), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 4/43 (9%)

Query: 24 VVLGTVLKSG-TSGRNASDEEARCFFLRAQKAGAI---RKNVH 62
          V L  VL+ G  SG N SDE +R FF+     GA+   R+N H
Sbjct: 27 VFLNVVLRYGFNSGINVSDEMSRYFFVWLTFIGAVVTFRENSH 69


>ZyjaG [S] COG3068 Uncharacterized protein conserved in bacteria EcZ
           Escherichia coli O157:H7 EDL933
          Length = 196

 Score = 31.6 bits (70), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 7/71 (9%)

Query: 9   SGASIMHGAEAFEGSVVLGTVLKSGTSGRNASDEEARCFFLRAQKAGAIRKNVHFQWEIA 68
           SG ++ H  E  + S+    +L+   +GR  SDEE +       +  A+ +    QWEI 
Sbjct: 109 SGETLEHAVEVSKTSITTVAMLEMTQAGREMSDEELK-------ENPAVEQEWDIQWEIF 161

Query: 69  SNVAPLEGGEM 79
             +A  E  ++
Sbjct: 162 RLLAECEERDI 172


>ECs4922 [S] COG3068 Uncharacterized protein conserved in bacteria Ecs
           Escherichia coli O157:H7
          Length = 196

 Score = 31.6 bits (70), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 7/71 (9%)

Query: 9   SGASIMHGAEAFEGSVVLGTVLKSGTSGRNASDEEARCFFLRAQKAGAIRKNVHFQWEIA 68
           SG ++ H  E  + S+    +L+   +GR  SDEE +       +  A+ +    QWEI 
Sbjct: 109 SGETLEHAVEVSKTSITTVAMLEMTQAGREMSDEELK-------ENPAVEQEWDIQWEIF 161

Query: 69  SNVAPLEGGEM 79
             +A  E  ++
Sbjct: 162 RLLAECEERDI 172


>yjaG [S] COG3068 Uncharacterized protein conserved in bacteria Eco
           Escherichia coli K12
          Length = 196

 Score = 31.6 bits (70), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 7/71 (9%)

Query: 9   SGASIMHGAEAFEGSVVLGTVLKSGTSGRNASDEEARCFFLRAQKAGAIRKNVHFQWEIA 68
           SG ++ H  E  + S+    +L+   +GR  SDEE +       +  A+ +    QWEI 
Sbjct: 109 SGETLEHAVEVSKTSITTVAMLEMTQAGREMSDEELK-------ENPAVEQEWDIQWEIF 161

Query: 69  SNVAPLEGGEM 79
             +A  E  ++
Sbjct: 162 RLLAECEERDI 172


>YDR280w [J] COG2123 RNase PH-related exoribonuclease Sce Saccharomyces
           cerevisiae
          Length = 305

 Score = 31.2 bits (69), Expect = 0.64,   Method: Composition-based stats.
 Identities = 10/29 (34%), Positives = 20/29 (68%)

Query: 67  IASNVAPLEGGEMANGNASSKSMLICSRI 95
           I++ ++P+ G +  NGN + +  ++CSRI
Sbjct: 79  ISTEISPMAGSQFENGNITGEDEVLCSRI 107