BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.4291.p         (91 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YPR054w [RTKL] COG0515 Serine/threonine protein kinase Sce Sacch...    29   2.9  

>YPR054w [RTKL] COG0515 Serine/threonine protein kinase Sce Saccharomyces
           cerevisiae
          Length = 388

 Score = 28.9 bits (63), Expect = 2.9,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 4   RAVTHPLMKRFHNPDDEKRSLEIVPQLEYEAWLN 37
           +A++HP +     PDDE   L+      YE+ LN
Sbjct: 330 QAISHPFLNEVRKPDDEPVCLQGPFDFTYESELN 363