BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.4284.p         (564 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CAC1858 [R] COG0714 MoxR-like ATPases Cac Clostridium acetobutyl...    32   2.8  

>CAC1858 [R] COG0714 MoxR-like ATPases Cac Clostridium acetobutylicum
          Length = 377

 Score = 32.3 bits (72), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 1/78 (1%)

Query: 382 HQGISRTALGRKYSRTEEFVFLKWVDNEWLTQQLENPAAVESARHRKAMTKPAYFKRQMK 441
             GI +T+L +K S+ EE+ ++    N     ++     V+     K++ K   +    K
Sbjct: 25  ESGIGKTSLVKKLSKDEEYYYINIDGNLLKEGEIGGLPVVQDYGDEKSLIKKTVYAAYYK 84

Query: 442 -KNWTEAIKNNPMRKVTL 458
                E +KNNP +KV L
Sbjct: 85  FIKIDEILKNNPNQKVLL 102