BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.4270.p         (97 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

asl4856 [S] COG4680 Uncharacterized protein conserved in bacteri...   114   5e-26
SMc00822 [S] COG4680 Uncharacterized protein conserved in bacter...   111   5e-25
mll1857 Non COG                                                       105   3e-23
ygjN [S] COG4680 Uncharacterized protein conserved in bacteria E...    48   6e-06
ZygjN [S] COG4680 Uncharacterized protein conserved in bacteria ...    48   6e-06

>asl4856 [S] COG4680 Uncharacterized protein conserved in bacteria Nos
          Nostoc sp. PCC 7120
          Length = 85

 Score =  114 bits (286), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 51/81 (62%), Positives = 64/81 (79%)

Query: 17 PAAETPLRAWHALASRVNWKTPADIKAAYRNASFIRNNRVVFDIKGNDYRLVVAVRYDKE 76
          P AE PL+AW   ASR  W +PADIK+ YRNAS I NNRVVF+IKGNDYRL+V +RYD  
Sbjct: 5  PDAEQPLKAWFDEASRAEWDSPADIKSTYRNASIIANNRVVFNIKGNDYRLIVHIRYDIG 64

Query: 77 LIYIRFVGTHRQYDAIDVETI 97
          +I+IRF+GTH++YD +D  +I
Sbjct: 65 IIFIRFLGTHKEYDNVDATSI 85


>SMc00822 [S] COG4680 Uncharacterized protein conserved in bacteria Sme
          Sinorhizobium meliloti
          Length = 98

 Score =  111 bits (277), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 49/98 (50%), Positives = 68/98 (69%), Gaps = 1/98 (1%)

Query: 1  MRIIALSTLRTFWTAHPAAETPLRAWHALASRVNWKTPADIKAAYR-NASFIRNNRVVFD 59
          M+IIA STLR FW  HP AETPL+ WHA+    NW  P+D+K+ +  N  F+ +NR++FD
Sbjct: 1  MQIIAKSTLRAFWEKHPQAETPLKTWHAVVRNANWAGPSDVKSMFGANVDFVSDNRIIFD 60

Query: 60 IKGNDYRLVVAVRYDKELIYIRFVGTHRQYDAIDVETI 97
          I G+ YRLVV V Y  + + I+F+GTH +YD I+ E +
Sbjct: 61 ISGHKYRLVVHVAYPFKRVLIKFMGTHDEYDKINPEKV 98


>mll1857 Non COG
          Length = 98

 Score =  105 bits (262), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 49/98 (50%), Positives = 64/98 (65%), Gaps = 1/98 (1%)

Query: 1  MRIIALSTLRTFWTAHPAAETPLRAWHALASRVNWKTPADIKAAYR-NASFIRNNRVVFD 59
          M+IIA   L+ FW  H  AE PL AW+   S  +WKTPADIK A+     F+ +NRV+FD
Sbjct: 1  MQIIAKKALKVFWAKHNHAEAPLTAWYVAVSNADWKTPADIKDAFGATVDFVGDNRVIFD 60

Query: 60 IKGNDYRLVVAVRYDKELIYIRFVGTHRQYDAIDVETI 97
          I GN YRL+V V Y    + I+FVGTH++YD +D E +
Sbjct: 61 IGGNKYRLIVHVAYKFHRVLIKFVGTHKEYDKVDPEKV 98


>ygjN [S] COG4680 Uncharacterized protein conserved in bacteria Eco
          Escherichia coli K12
          Length = 104

 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 2/92 (2%)

Query: 1  MRIIALSTLRTFWTAHPAAETPLRAWHALASRVNWKTPADIKAAYRNASFIR--NNRVVF 58
          M +I    L+     +P  +T L A     ++  +K P  +KA + +    +  +   VF
Sbjct: 1  MHLITQKALKDAAEKYPQHKTELVALGNTIAKGYFKKPESLKAVFPSLDNFKYLDKHYVF 60

Query: 59 DIKGNDYRLVVAVRYDKELIYIRFVGTHRQYD 90
          ++ GN+ R+V  V ++ +  YIR V TH++YD
Sbjct: 61 NVGGNELRVVAMVFFESQKCYIREVMTHKEYD 92


>ZygjN [S] COG4680 Uncharacterized protein conserved in bacteria EcZ
          Escherichia coli O157:H7 EDL933
          Length = 104

 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 2/92 (2%)

Query: 1  MRIIALSTLRTFWTAHPAAETPLRAWHALASRVNWKTPADIKAAYRNASFIR--NNRVVF 58
          M +I    L+     +P  +T L A     ++  +K P  +KA + +    +  +   VF
Sbjct: 1  MHLITQKALKDAAEKYPQHKTELVALGNTIAKGYFKKPESLKAVFPSLDNFKYLDKHYVF 60

Query: 59 DIKGNDYRLVVAVRYDKELIYIRFVGTHRQYD 90
          ++ GN+ R+V  V ++ +  YIR V TH++YD
Sbjct: 61 NVGGNELRVVAMVFFESQKCYIREVMTHKEYD 92