BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.4258.p         (135 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc0752 Non COG                                                        55   3e-08

>RSc0752 Non COG
          Length = 125

 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/118 (33%), Positives = 65/118 (55%)

Query: 17  NPGLTAGLLGLAKNLLGLIISRIELASLEMSEIGANLVRFAVIFVLAAVALWFAIAFWSV 76
           +P L A L  LA  ++ +  +R+ELAS+E++E    L+  A + +LA   +  AI   + 
Sbjct: 6   SPKLLASLKKLAGTVVSMAQTRLELASVELAEEKERLLGAAFLGMLAVSLIGLAIMTLTA 65

Query: 77  LIVMLAWDTWGWKILALLGFIFSVATAGLVWYARSVLLQGKLSLPQTMGELRKDRDAL 134
           LI +L WDT+ W+ LA++  ++++  A  +W  R  L         T+ EL KDR+ L
Sbjct: 66  LIAILFWDTYRWQSLAVMAALYALGAAACLWKVRMSLRSAPPLFEATLAELDKDREIL 123